Protein Overview: MRPS28

General Information:
Name(s) found:	MRPS28 / YDR337W [SGD]
Description(s) found: Found 34 descriptions. SHOW ALL	Mitochondrial ribosomal protein of the small subunit [SGD]
Organism:	Saccharomyces cerevisiae
Length:	286 amino acids
Gene Ontology:
Cellular Component:	mitochondrion [IDA] mitochondrial small ribosomal subunit [IDA][TAS]
Biological Process:	ribosomal small subunit assembly [ISS] translation [IDA][TAS]
Molecular Function:	RNA binding [ISS] structural constituent of ribosome [IDA][TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVGRNAIL NLRISLCPLF MGKRSFVSSP VSNSAKAVKF LKAQRRKQKN EAKQATLKAS  60
   61 TDKVDPVLGR ADTPFITRIM AELKEPLVLS KGYNIEEVDK FLAAIESAKR ERAELSGLNT 120
  121 EVVGIEDIEK LEDRREAILR ILSMRNSENK NAIKMAVELA RKEFERFPGD TGSSEVQAAC 180
  181 MTVRIQNMAN HIKEHRKDFA NTRNLRILVQ QRQAILRYLK RDNPEKYYWT IQKLGLNDAA 240
  241 ITDEFNMDRR YMQDYEFFGD KILIRDSKKV ANQKRKEIRK QKRATF

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Riffle et al. (2010) (Unpublished Data)		EHD3 MRP1 MRP10 MRP13 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 RSM10 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7
View Details	(MIPS) Mewes HW, et al. (2004)		MRP1 MRP10 MRP13 MRP17 MRP2 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 PPE1 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 VAR1 YMR31
View Details	Krogan NJ, et al. (2006)		CBF1 FYV4 MAM33 MRP1 MRP10 MRP17 MRP21 MRP4 MRP51 MRPL8 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS9 NAM9 NCL1 PET123 RIB4 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 SVL3 SWS2 YDR124W YJR096W YKL151C YSP1
View Details	Gavin AC, et al. (2006)		EHD3 MRP1 MRP13 MRP17 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS5 MRPS8 MRPS9 NAM9 PET123 RSM10 RSM19 RSM22 RSM23 RSM25 RSM27 RSM7
View Details	Gavin AC, et al. (2002)		BEM2 BNI1 CCL1 CCM1 CDC48 CKA1 CKA2 CKB1 DBP2 DCS2 DNA2 DOA1 ECM16 ECM29 EHD3 FAP1 FPR1 FYV4 GEP3 HSC82 KAP95 KIN28 MEC1 MPH1 MRP1 MRP10 MRP13 MRP17 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS5 MRPS8 MRPS9 MSH2 MSH6 NAM9 NPL4 NUP120 NUP145 NUP84 NUP85 PAP2 PDC1 PET123 PGK1 PSD2 PUS7 RAD23 RAD34 RAD4 RAD52 RAI1 REG1 RFA1 RFA2 RIX1 RPA135 RPA190 RPN10 RPN12 RPN3 RPN6 RPN8 RPN9 RPO31 RPP2B RPT2 RPT3 RPT6 RSM10 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 SEC13 SEC16 SEC23 SEC31 SEH1 SHP1 SPT7 SRO7 SSL1 STM1 TFA1 TFB1 TFB3 TFB4 TIF4631 TIF6 UBP10 UFD1 UTP20 UTP22 YDR049W
View Details	Qiu et al. (2008)		EHD3 IMG1 IMG2 MAM33 MHR1 MNP1 MRP1 MRP10 MRP13 MRP17 MRP2 MRP20 MRP21 MRP4 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL44 MRPL49 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 PPE1 RPS0A RPS11A, RPS11B RPS14A RPS17A RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 RTC6 SWS2 VAR1 YDR115W YML6 YMR31

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	PRM3	MRPS28	1	Unpublished Fields Lab Data
View Screen	SPT21	MRPS28	1	Unpublished Fields Lab Data
View Screen	HUB1	MRPS28	1	Unpublished Fields Lab Data
View Screen	HUB1	MRPS28	1	Unpublished Fields Lab Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

	PROTEIN(S)	PUBLICATION
View Data	MRPS28	Huh WK, et al. (2003)

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..132]	deduced	N/A	No confident structure predictions are available.
2	View Details	[133..286]	PSI-BLAST	134.156545	70S ribosome functional complex

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.87

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2