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Protein Overview: MRPL9

General Information:
Name(s) found: MRPL9 / YGR220C [SGD]
Description(s) found:
Found 30 descriptions.
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  • Mitochondrial ribosomal protein of the large subunit [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [TASLink to PubMed article]
    Biological Process: ribosomal large subunit assembly [ISSLink to PubMed article]
    translation [TASLink to PubMed article]
    Molecular Function: structural constituent of ribosome [TASLink to PubMed article]
    peptidyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLQGSIF SISKLHVRYS STRPFLVAPS IANSITTEAP AINHSPELAN ARKWLPKRCG  60
   61 LITRKKGMMP YFDKSTGERS AATILEVNNV EVIMHRTSEV NGYFACQVGY GSRHLSKVSR 120
  121 QMLGHFASKV VNPKEHVAEF RVKDEKGLIP PGTLLKPSFF KEGQYVDVRS VSKGKGFTGV 180
  181 MKRYGFKGLR ASHGTSIMHR HGGSYGQNQD PGRVLPGRKM PGHMGNEHVT IQNVKVLKVD 240
  241 DENNVIWVKG SVAGPKNSFV KIQDAIKKT

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) IMG1 MHR1 MRP49 MRPL1 MRPL13 MRPL17 MRPL20 MRPL22 MRPL8 MRPL9 YML6
    View Details (MIPS) Mewes HW, et al. (2004) IMG1 IMG2 MNP1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 RML2 RTC6 YDR115W YML6
    View Details Krogan NJ, et al. (2006) IMG2 MRP20 MRPL1 MRPL10 MRPL15 MRPL25 MRPL3 MRPL4 MRPL40 MRPL9
    View Details Gavin AC, et al. (2006) IMG1 MHR1 MRP49 MRPL35 MRPL8 MRPL9 YML6
    View Details Qiu et al. (2008) IMG1 IMG2 MHR1 MNP1 MRP1 MRP10 MRP17 MRP20 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS8 NAM9 PET123 RML2 RSM10 RSM18 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 RTC6 SWS2 VAR1 YDR115W YML6 YMR31 YNL122C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data MRPL9 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87]
    [155..175]
    [225..269]    		 PSI-BLAST 377.927757 No description for 1lnrB_ was found.
    2 View Details [88..154]
    [176..224]    		 PSI-BLAST 377.927757 No description for 1lnrB_ was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  8.74976995123472 bayes_pls_golite062009
  • structural molecule activity
    		•  8.17182185344538 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  3.0445946370998 bayes_pls_golite062009
  • translation initiation factor activity
    		•  2.68619850021832 bayes_pls_golite062009
  • translation regulator activity
    		•  2.20347076721097 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  2.18748808024313 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.81199659576461 bayes_pls_golite062009
  • binding
    		•  1.44145316612405 bayes_pls_golite062009
  • RNA binding
    		•  0.798696391797967 bayes_pls_golite062009
  • protein binding
    		•  0.449435758237719 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle