Protein Overview: NOP16

General Information:
Name(s) found:	NOP16 / YER002W [SGD]
Description(s) found: SHOW ONLY BEST	gi\|731433\|sp\|P40007.1\|NOP16_YEAST RecName: Full=Nucleolar protein 16 [NCBI NR] gi\|6320838\|ref\|NP_010917.1\| Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis; Nop16p [Saccharomyces cerevisiae] [NCBI NR] gi\|603594\|gb\|AAB64535.1\| Yer002wp [Saccharomyces cerevisiae] [NCBI NR] gi\|45269515\|gb\|AAS56138.1\| YER002W [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S50460 hypothetical protein YER002w - yeast (Saccharomyces cerevisiae) [NCBI NR] Uncharacterized protein YER002W - Saccharomyces cerevisiae (Baker's yeast) [Swiss-Prot] Nucleolar protein 16 OS=Saccharomyces cerevisiae GN=NOP16 PE=1 SV=1 [Swiss-Prot] NOP16 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis [mips] Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis [SGD] YER002W, Chr V from 156802-157497 [yeast_orfs2] Chr V from 156802-157497 [yeastorf3.fasta] (P40007) Hypothetical 26.9 kDa protein in MNN1-PMI40 intergenic region [4932.FASTACCERV.txt] NOP16 SGDID:S0000804, Chr V from 156802-157497, Verified ORF [yeastflysequest.fasta] Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis [Saccharomyces cerevisiae]gi\|45269515\|gb\|AAS56138.1\| YER002W [Saccharomyces cerevisiae]gi\|1077627\|pir\|\|S50460 hypothetical protein YER002w - yeast (Saccharomyces ce [nrdb_11152004_Chlamydomonas] NOP16 SGDID:S000000804, Chr V from 156802-157497, Verified ORF, "Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis; Nop16p [Saccharomyces cerevisiae] [nr-271106-contam.fasta] YER002W [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Yer002wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Uncharacterized protein YER002W [nr-271106-contam.fasta] [chemostatdb.fasta] Nucleolar protein 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP16 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] NOP16 SGDID:S000000804, Chr V from 156803-157498, Genome Release 64-1-1, Verified ORF, "Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis" [yeast-030211-contam.fasta] NOP16 SGDID:S000000804, Chr V from 156803-157498, Genome Release 64-2-1, Verified ORF, "Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis" [20141208_orf_trans.fasta] YER002W SGDID:S000000804, Chr V from 156803-157498, Genome Release 64-1-1, Verified ORF, "Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
Organism:	Saccharomyces cerevisiae
Length:	231 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA ] nucleolus [IDA]
Biological Process:	ribosomal large subunit biogenesis [IMP][IPI]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSVRKRKMN RSSVGKATRR NKDKQRKINI QSNPIIAANW DYSLTMAQNY KKLGLRAKLQ  60
   61 TPAGGKEADL SKVVKRIPLT KPVLDEDEDE DEGEDEQNDY NAATVELDEN EIPEGGARIQ 120
  121 RDKNGDVVRV VYGKKKNFDA DEDVNEIKAR DTTEETEVVK KLEELASRPV IRKERSQSER 180
  181 EEEWLEKLYK KHGDDYKKMF FDKKLNIYQQ SEGDLKRRLL RWKKRNGIAS K

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Riffle et al. (2010) (Unpublished Data)		NOC3 NOP16
View Details	Gavin AC, et al. (2002)		ARX1 BEM2 BMS1 BRX1 BUD20 CIC1 CLU1 CYR1 CYS4 DBP10 DBP9 DCP2 DRS1 EBP2 ERB1 FPR4 GCN1 HAS1 HDA1 HER1 HIS3 INP2 IPI1 IPI3 KRE33 LHP1 LOC1 LSG1 MAK21 MAK5 MDN1 MIS1 MRT4 NAP1 NIP1 NIP7 NMD3 NOC2 NOC3 NOG1 NOG2 NOP1 NOP12 NOP15 NOP16 NOP2 NOP4 NOP56 NOP7 NSA1 NSA2 NUG1 PRT1 PUF6 REI1 RIX1 RIX7 RLP24 RLP7 RPA135 RPA190 RPF1 RPF2 RPG1 RPP2B RPT6 RRP1 RRP12 RSA3 RSA4 RTR1 SDA1 SEC7 SKI2 SNU13 SPB1 SPB4 SSF1 TIF6 TUB3 URB1 UTP10 UTP20 UTP22 YGL036W YTM1
View Details	Ho Y, et al. (2002)		AAC3 ARP4 ASA1 ATG17 ATG29 ATP3 BRX1 CDC33 CIC1 CIS1 CYS4 EBP2 ERB1 EXG1 FOL2 FPR4 GRH1 HAP2 HAP5 IPP1 LOC1 MAM33 MRT4 MTQ1 NAP1 NMD5 NOC3 NOG1 NOP15 NOP16 NOP2 NOP7 NSA2 PIB2 POL5 PSE1 RHR2 RLP7 RRP17 SAH1 SAP190 SCS2 SPE3 SSK2 THI21 TIF1, TIF2 TIF6 YRA1 YRA2 YTM1
View Details	Qiu et al. (2008)		BRX1 KRR1 NOP15 NOP16 NUG1 PXR1 RPL15B RPL27A

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	RPA135	No Comments	Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

	PROTEIN(S)	PUBLICATION
View Data	NOP16 and NOP56	Huh WK, et al. (2003)
View Data	NOP16	Huh WK, et al. (2003)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..231]	deduced	N/A	No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: NOP16

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: