YRC Public Data Repository

Run Information:

Bait Protein:	RPA135
Organism:	Saccharomyces cerevisiae
Publication:	Schneider DA, French SL, Osheim YN, Bailey AO, Vu L, Dodd J, Yates JR, Beyer AL, Nomura M. RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing. Proc Natl Acad Sci U S A. 2006;103(34):12707-12.
Comments:	his-HA tag on RPA135
Raw Data:	Download DTASelect Filter text Download DTASelect TXT file

UNFILTERED Run Results: [filter] [View our MS interpretation guidelines.]
	Hit Protein	Protein Desc	Sequence Count	Spectrum Count	Sequence Coverage	NSAF	Mol. Wt.
[View Peptides]	SSB1	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, functions with J-protein partn...	42	65	61.0%	0.0244	66602
[View Peptides]	SSB2	Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, functions with J-protein partn...	41	65	59.2%	0.0244	66595
[View Peptides]	RPS17B	Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Ap and has similari...	8	9	58.1%	0.0152	15803
[View Peptides]	RPS17A	Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Bp and has similari...	8	9	58.1%	0.0152	15788
[View Peptides]	SUP35	Translation termination factor eRF3; altered protein conformation creates the [PSI(+)] prion, a domi...	42	111	55.5%	0.0372	76551
[View Peptides]	SSA2	ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shoc...	29	53	54.1%	0.0191	69470
[View Peptides]	RPA190	RNA polymerase I largest subunit A190	91	190	53.8%	0.0262	186431
[View Peptides]	RPA12	RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is resp...	6	12	53.6%	0.0221	13661
[View Peptides]	SSA1	ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport;...	30	54	52.0%	0.0193	69768
[View Peptides]	RPC40	RNA polymerase subunit AC40, common to RNA polymerase I and III	16	31	50.7%	0.0213	37687
[View Peptides]	RPB4	RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitmen...	12	20	49.8%	0.0208	25414
[View Peptides]	gi\|7463016\|pir\|\|...	lysyl endopeptidase (EC 3.4.21.50) - Lysobacter enzymogenes	11	16	49.1%	0.0137	27961
[View Peptides]	IBI2	Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion p...	4	4	48.7%	0.00467	22179
[View Peptides]	CMD1	Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, act...	3	3	47.6%	0.00469	16135
[View Peptides]	RPL30	Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein;...	3	3	47.6%	0.00657	11415
[View Peptides]	RPO26	RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; simila...	4	11	45.2%	0.0163	17910
[View Peptides]	RPA34	RNA polymerase I subunit A34.5	12	20	44.2%	0.0197	26875
[View Peptides]	RPC19	RNA polymerase subunit AC19, common to RNA polymerases I and III	4	6	43.7%	0.00971	16151
[View Peptides]	RPP2A	Ribosomal protein P2 alpha, a component of the ribosomal stalk, which is involved in the interaction...	4	9	43.4%	0.0195	10746
[View Peptides]	NRL_1IKFL, Conta...	owl\|\| Immunoglobulin igg1-kappa antibody fragment fab complexed With...	8	13	43.0%	0.014	23527
[View Peptides]	SPT5	Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a compl...	55	88	42.4%	0.019	115650
[View Peptides]	Contaminant_S682...	owl\|S68241\| immunoglobulin light chain (Mab13-1) - mouse (fragment)	8	13	42.2%	0.0137	23846
[View Peptides]	RPA135	RNA polymerase I second largest subunit A135	38	95	42.1%	0.0181	135742
[View Peptides]	RPA49	RNA polymerase I subunit A49	21	44	41.9%	0.0244	46651
[View Peptides]	RPB5	RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects tra...	9	18	40.5%	0.0192	25079
[View Peptides]	RPL2A, RPL2B	Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E....	10	17	40.2%	0.0154	27408
[View Peptides]	RPL2A, RPL2B	Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp and has similarity to E....	10	17	40.2%	0.0154	27408
[View Peptides]	RPC10	RNA polymerase subunit ABC10-alpha, found in RNA polymerase complexes I, II, and III	2	4	40.0%	0.0131	7716
[View Peptides]	RPB3	RNA polymerase II third largest subunit B44, part of central core; similar to prokaryotic alpha subu...	7	18	39.0%	0.013	35298
[View Peptides]	DDR48	DNA damage-responsive protein, expression is increased in response to heat-shock stress or treatment...	9	10	37.7%	0.00534	46233
[View Peptides]	RPL10	Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subu...	4	4	34.4%	0.00416	25361
[View Peptides]	RPA43	RNA polymerase I subunit A43	9	48	33.1%	0.0338	36224
[View Peptides]	RPL8B	Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has simila...	7	10	32.4%	0.00898	28112
[View Peptides]	ACT1	Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functio...	7	13	32.0%	0.00797	41690
[View Peptides]	RPO21	RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapep...	44	62	31.7%	0.00822	191610
[View Peptides]	RPL25	Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit, has similarit...	4	7	31.7%	0.0113	15758
[View Peptides]	RPB2	RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subun...	29	56	30.1%	0.0105	138751
[View Peptides]	RPL23B, RPL23A	Protein component of the large (60S) ribosomal subunit, identical to Rpl23Ap and has similarity to E...	2	2	27.7%	0.00335	14473
[View Peptides]	RPL23B, RPL23A	Protein component of the large (60S) ribosomal subunit, identical to Rpl23Ap and has similarity to E...	2	2	27.7%	0.00335	14473
[View Peptides]	DEF1	RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...	21	30	27.5%	0.00934	83973
[View Peptides]	RPL8A	Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has simila...	6	9	27.3%	0.00808	28125
[View Peptides]	RPL1A, RPL1B	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	5	5	27.2%	0.0053	24486
[View Peptides]	RPL1A, RPL1B	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	5	5	27.2%	0.0053	24486
[View Peptides]	SSC1	Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitoc...	16	21	26.3%	0.00738	70628
[View Peptides]	PIN3	Protein that induces appearance of [PIN+] prion when overproduced	3	3	26.0%	0.00321	23539
[View Peptides]	RPL17A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similari...	6	8	25.5%	0.00999	20549
[View Peptides]	TDH3	Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis; tet...	5	5	25.3%	0.00346	35747
[View Peptides]	RPL13B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Ap; not essential f...	4	6	25.1%	0.00693	22525
[View Peptides]	RPS4B, RPS4A	Protein component of the small (40S) ribosomal subunit; identical to Rps4Ap and has similarity to ra...	4	4	24.5%	0.00352	29410
[View Peptides]	RPS4B, RPS4A	Protein component of the small (40S) ribosomal subunit; identical to Rps4Ap and has similarity to ra...	4	4	24.5%	0.00352	29410
[View Peptides]	RPL15A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Bp and has similari...	6	10	24.5%	0.0113	24422
[View Peptides]	LSB1	Protein containing an N-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldri...	3	3	24.1%	0.00286	26139
[View Peptides]	RPS6A, RPS6B	Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to ra...	4	4	23.7%	0.0039	26996
[View Peptides]	RPS6A, RPS6B	Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to ra...	4	4	23.7%	0.0039	26996
[View Peptides]	RPL13A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp; not essential f...	3	3	23.6%	0.00346	22554
[View Peptides]	RPL36A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	3	3	23.0%	0.00689	11124
[View Peptides]	RPL36B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl36Ap and has similari...	3	3	23.0%	0.00689	11135
[View Peptides]	PDC1	Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates...	7	8	22.7%	0.00327	61495
[View Peptides]	SSE1	ATPase that is a component of the heat shock protein Hsp90 chaperone complex; binds unfolded protein...	11	11	21.9%	0.00365	77367
[View Peptides]	ENO2	Enolase II, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosp...	6	11	21.5%	0.00578	46914
[View Peptides]	RPL19B, RPL19A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Ap and has similari...	5	5	21.2%	0.00608	21704
[View Peptides]	RPL19B, RPL19A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Ap and has similari...	5	5	21.2%	0.00608	21704
[View Peptides]	RPB8	RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III	2	2	21.2%	0.00315	16511
[View Peptides]	contaminant_NRL_...	owl\|\| Cha255 immunoglobulin fab' fragment (igg1-lambda) complex With...	4	5	20.7%	0.00539	22638
[View Peptides]	RPL12B, RPL12A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b d...	2	5	20.6%	0.00696	17823
[View Peptides]	RPL12B, RPL12A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap; rpl12a rpl12b d...	2	5	20.6%	0.00696	17823
[View Peptides]	RPL17B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similari...	5	7	20.1%	0.00874	20551
[View Peptides]	RPP2B	Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction ...	2	2	20.0%	0.00418	11050
[View Peptides]	RPL15B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Ap and has similari...	5	9	19.6%	0.0101	24422
[View Peptides]	TEF1, TEF2	Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ...	5	6	19.4%	0.00301	50033
[View Peptides]	TEF1, TEF2	Translational elongation factor EF-1 alpha; also encoded by TEF2; functions in the binding reaction ...	5	6	19.4%	0.00301	50033
[View Peptides]	RPB11	RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit	2	2	19.2%	0.00383	13616
[View Peptides]	PAB1	Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th...	7	7	19.1%	0.00279	64344
[View Peptides]	RPA14	RNA polymerase I subunit A14	2	2	19.0%	0.00335	14585
[View Peptides]	YEL007W	Putative protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1)	7	10	18.5%	0.00345	72534
[View Peptides]	TDH2	Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tet...	4	4	18.1%	0.00277	35847
[View Peptides]	RPL4A	N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to ...	7	11	18.0%	0.00698	39092
[View Peptides]	RPL4B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap and has similarit...	7	12	18.0%	0.00762	39062
[View Peptides]	BRE5	Ubiquitin protease cofactor, forms deubiquitination complex with Ubp3p that coregulates anterograde ...	5	7	16.7%	0.00312	57674
[View Peptides]	RPS3	Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease ...	2	2	16.7%	0.00192	26503
[View Peptides]	RPS1A	Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Bp and has similarit...	3	3	16.5%	0.0027	28743
[View Peptides]	gi\|2119236, gi\|4...	sp\|P35527\|K1CI_HUMAN Keratin, type I cytoskeletal 9 (Cytokeratin 9) (K9) (CK 9), gi\|545257\|gb\|AAC60...	6	7	15.8%	0.00259	61987
[View Peptides]	RPS24A, RPS24B	Protein component of the small (40S) ribosomal subunit; identical to Rps24Bp and has similarity to r...	2	2	15.6%	0.0034	15329
[View Peptides]	RPS24A, RPS24B	Protein component of the small (40S) ribosomal subunit; identical to Rps24Bp and has similarity to r...	2	2	15.6%	0.0034	15329
[View Peptides]	RPL9B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap and has similarit...	2	2	15.2%	0.00241	21657
[View Peptides]	YEF3	Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes b...	7	8	14.9%	0.00176	115945
[View Peptides]	RPL27B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Ap and has similari...	2	2	14.7%	0.00338	15505
[View Peptides]	RPL27A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl27Bp and has similari...	2	2	14.7%	0.00338	15531
[View Peptides]	SOK2	Nuclear protein that plays a regulatory role in the cyclic AMP (cAMP)-dependent protein kinase (PKA)...	5	5	14.5%	0.00146	85643
[View Peptides]	YPR137C-A, YAR010C	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	3	14.5%	0.00157	49072
[View Peptides]	YDR365W-A, YPL25...	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	3	14.5%	0.00157	48953
[View Peptides]	YDR365W-A, YPL25...	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	3	14.5%	0.00157	48953
[View Peptides]	YDR261C-C	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YDRCTY1-3 TYB is mutant and probably no...	3	3	14.5%	0.00157	49009
[View Peptides]	RPL20B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Ap and has similari...	2	2	14.4%	0.00264	20713
[View Peptides]	ENO1	Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph...	4	8	14.2%	0.00421	46816
[View Peptides]	RPL20A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similari...	2	2	14.0%	0.00258	21236
[View Peptides]	RNQ1	[PIN(+)] prion, an infectious protein conformation that is generally an ordered protein aggregate	3	6	13.3%	0.0034	42580
[View Peptides]	RPP0	Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e; shown to be phosphoryl...	3	4	13.1%	0.00295	33717
[View Peptides]	SEC17	Peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' ste...	2	2	13.0%	0.00157	32803
[View Peptides]	UBP3	Ubiquitin-specific protease that interacts with Bre5p to co-regulate anterograde and retrograde tran...	6	6	12.9%	0.00151	101917
[View Peptides]	RPL28	Ribosomal protein of the large (60S) ribosomal subunit, has similarity to E. coli L15 and rat L27a r...	3	4	12.8%	0.00617	16722
[View Peptides]	RPL3	Protein component of the large (60S) ribosomal subunit, has similarity to E. coli L3 and rat L3 ribo...	4	4	12.7%	0.00238	43758
[View Peptides]	Contaminant_KERA...		5	5	12.6%	0.00179	65494
[View Peptides]	YOR192C-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	4	12.6%	0.0021	49736
[View Peptides]	YDR261W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	4	12.6%	0.0021	49724
[View Peptides]	YDR210W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	4	12.6%	0.0021	49835
[View Peptides]	YCL020W	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	3	4	12.6%	0.0021	49841
[View Peptides]	RPS14A	Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processin...	3	3	12.4%	0.00503	14537
[View Peptides]	RPS14B	Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processin...	3	3	12.3%	0.005	14650
[View Peptides]	PIN4	Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contai...	4	4	12.3%	0.00138	73776
[View Peptides]	NRL_1IKFH, Conta...	owl\|\| Immunoglobulin igg1-kappa antibody fragment fab complexed With...	3	4	12.3%	0.00403	24756
[View Peptides]	SSA3	ATPase involved in protein folding and the response to stress; plays a role in SRP-dependent cotrans...	9	26	12.2%	0.00921	70547
[View Peptides]	CDC19	Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvat...	4	4	11.8%	0.00184	54545
[View Peptides]	ATP1	Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily ...	3	3	11.7%	0.00126	58618
[View Peptides]	YBR012W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49068
[View Peptides]	YGR038C-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49034
[View Peptides]	YGR027W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49056
[View Peptides]	YER159C-A, YDR31...	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49129
[View Peptides]	YER159C-A, YDR31...	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49129
[View Peptides]	YDR210C-C	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49187
[View Peptides]	YDR098C-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	11.6%	0.00104	49057
[View Peptides]	RPL16B	N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA;...	2	2	11.6%	0.00232	22249
[View Peptides]	SSA4	Heat shock protein that is highly induced upon stress; plays a role in SRP-dependent cotranslational...	7	16	11.5%	0.00573	69651
[View Peptides]	RPS1B	Ribosomal protein 10 (rp10) of the small (40S) subunit; nearly identical to Rps1Ap and has similarit...	2	2	11.4%	0.0018	28812
[View Peptides]	CTS2	Protein similar to Ashbya gossypii sporulation-specific chitinase	3	3	11.0%	0.00135	59118
[View Peptides]	MOT3	Nuclear transcription factor with two Cys2-His2 zinc fingers; involved in repression of a subset of ...	3	3	10.8%	0.00141	54382
[View Peptides]	YPL247C	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...	3	3	10.5%	0.00132	57324
[View Peptides]	TDH1	Glyceraldehyde-3-phosphate dehydrogenase, isozyme 1, involved in glycolysis and gluconeogenesis; tet...	2	2	10.5%	0.00138	35750
[View Peptides]	RPL34A	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp and has similari...	2	2	9.9%	0.0038	13639
[View Peptides]	RPL34B	Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Ap and has similari...	2	2	9.9%	0.0038	13641
[View Peptides]	ATP2	Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily c...	3	3	9.4%	0.00135	54794
[View Peptides]	FAS1	Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty a...	12	12	9.3%	0.00134	228689
[View Peptides]	FKS1	Catalytic subunit of 1,3-beta-D-glucan synthase, functionally redundant with alternate catalytic sub...	10	11	9.0%	0.00135	214849
[View Peptides]	FAS2	Alpha subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty ...	7	9	8.7%	0.0011	206945
[View Peptides]	YFL002W-B, YGR161W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	3	8.7%	0.00157	49762
[View Peptides]	YFL002W-B, YGR161W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	3	8.7%	0.00157	49762
[View Peptides]	YBL100W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	7.5%	0.00105	49898
[View Peptides]	YOR343W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	7.5%	0.00105	49868
[View Peptides]	YLR410W-A	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	7.5%	0.00105	49772
[View Peptides]	YDR034C-C	Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; ...	2	2	7.5%	0.00105	49689
[View Peptides]	PGK1	3-phosphoglycerate kinase, catalyzes transfer of high-energy phosphoryl groups from the acyl phospha...	2	2	7.5%	0.0011	44738
[View Peptides]	DED1	ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, required for translation initiation of all ye...	3	3	7.3%	0.00114	65553
[View Peptides]	SFB3	Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, required for cargo selection du...	2	2	7.1%	4.95E-4	103950
[View Peptides]	MNN1	Alpha-1,3-mannosyltransferase, integral membrane glycoprotein of the Golgi complex, required for add...	2	2	6.8%	6.03E-4	88529
[View Peptides]	VMA2	Subunit B of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase), a...	2	2	6.4%	8.89E-4	57749
[View Peptides]	KRT10	keratin 10	3	3	6.2%	0.00116	59519
[View Peptides]	PSP1	Asn and gln rich protein of unknown function; high-copy suppressor of POL1 (DNA polymerase alpha) an...	3	4	5.7%	0.00109	95348
[View Peptides]	PAN2	Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tai...	3	4	5.5%	8.24E-4	127039
[View Peptides]	HSC82	Cytoplasmic chaperone of the Hsp90 family, redundant in function and nearly identical with Hsp82p, a...	3	3	5.5%	9.78E-4	80900
[View Peptides]	HSP82	Hsp90 chaperone required for pheromone signaling and negative regulation of Hsf1p; docks with Tom70p...	3	3	5.5%	9.72E-4	81406
[View Peptides]	HSP60	Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides...	2	2	5.4%	8.04E-4	60752
[View Peptides]	CHC1	Clathrin heavy chain, subunit of the major coat protein involved in intracellular protein transport ...	5	5	5.3%	6.95E-4	187233
[View Peptides]	gi\|1143492, gi\|8...	pir\|\|A29821 dnaK-type molecular chaperone HSPA5 precursor - human, gi\|386758\|gb\|AAA52614.1\| GRP78 p...	3	4	5.1%	0.00141	72116
[View Peptides]	GRP78_RAT	78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1	3	4	5.0%	0.00141	72347
[View Peptides]	gi\|109893	pir\|\|A37048 dnaK-type molecular chaperone grp78 precursor - mouse	3	4	5.0%	0.0014	72421
[View Peptides]	contaminant_GR78...		3	4	5.0%	0.00141	72379
[View Peptides]	SAP185	Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; me...	2	3	4.9%	6.52E-4	121403
[View Peptides]	NUP100	Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a re...	2	2	4.8%	4.79E-4	99988
[View Peptides]	GSC2	Catalytic subunit of 1,3-beta-glucan synthase, involved in formation of the inner layer of the spore...	5	5	4.4%	6.06E-4	216988
[View Peptides]	PBP1	Component of glucose deprivation induced stress granules, involved in P-body-dependent granule assem...	2	5	4.4%	0.00159	78782
[View Peptides]	PAN3	Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tai...	2	2	4.4%	6.77E-4	76455
[View Peptides]	PAN1	Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, associates with actin patches on th...	3	3	4.3%	4.66E-4	160266
[View Peptides]	KAR2	ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i...	2	3	4.3%	0.00101	74468
[View Peptides]	KAR2	ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i...	2	3	4.3%	0.00101	74468
[View Peptides]	CBK1	Serine/threonine protein kinase that regulates cell morphogenesis pathways; involved in cell wall bi...	2	2	4.2%	6.08E-4	86946
[View Peptides]	NRP1	Putative RNA binding protein of unknown function; localizes to stress granules induced by glucose de...	2	2	4.2%	6.39E-4	79299
[View Peptides]	YDR261C-D	Retrotransposon TYA Gag and TYB Pol genes; in YDRCTY1-3 TYB is mutant and probably non-functional	3	3	4.0%	4.3E-4	181660
[View Peptides]	contaminant_GR78...		4	7	3.9%	0.00242	73235
[View Peptides]	GR78_SCHPO, cont...		2	3	3.9%	0.00104	73081
[View Peptides]	DRS2	Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre...	2	2	3.8%	3.39E-4	153844
[View Peptides]	YER138C	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	3	3.6%	3.93E-4	198561
[View Peptides]	YDR365W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	3	3.6%	3.93E-4	198658
[View Peptides]	GR78_MAIZE, cont...		3	5	3.6%	0.00246	51689
[View Peptides]	Contaminant_KERA...		2	2	3.4%	9.76E-4	51531
[View Peptides]	contaminant_KERA...		2	2	3.4%	9.8E-4	50499
[View Peptides]	SLA1	Cytoskeletal protein binding protein required for assembly of the cortical actin cytoskeleton; inter...	2	2	3.3%	3.69E-4	135848
[View Peptides]	YCL019W	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	4	3.1%	5.19E-4	202095
[View Peptides]	YOR192C-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	4	3.1%	5.19E-4	201983
[View Peptides]	YDR261W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	4	3.1%	5.19E-4	201961
[View Peptides]	YDR210W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	3	4	3.1%	5.19E-4	202094
[View Peptides]	NUP116	Subunit of the Nup82 subcomplex of the nuclear pore complex; localized to both sides of the pore; co...	2	2	3.1%	4.13E-4	116234
[View Peptides]	YGR038C-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198520
[View Peptides]	YGR027W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198656
[View Peptides]	YER160C	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198568
[View Peptides]	YDR316W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198526
[View Peptides]	YDR210C-D	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198838
[View Peptides]	YDR098C-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198594
[View Peptides]	YBR012W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	2.9%	2.62E-4	198868
[View Peptides]	RPG1	eIF3a subunit of the core complex of translation initiation factor 3 (eIF3), essential for translati...	2	4	2.7%	9.54E-4	110344
[View Peptides]	SEC31	Component of the Sec13p-Sec31p complex of the COPII vesicle coat, required for vesicle formation in ...	2	2	2.4%	3.61E-4	138703
[View Peptides]	YFL002W-A, YGR161W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	3	2.1%	3.9E-4	202038
[View Peptides]	YFL002W-A, YGR161W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	3	2.1%	3.9E-4	202038
[View Peptides]	YOR343W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	1.9%	2.6E-4	202160
[View Peptides]	YLR410W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	1.9%	2.6E-4	202121
[View Peptides]	YDR034C-D	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	1.9%	2.6E-4	201964
[View Peptides]	YBL100W-B	Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is proces...	2	2	1.9%	2.6E-4	202214

View Mass Spectrometry Run