| General Information: |
|
| Name(s) found: |
YPR137C-A
[SGD]
YAR010C [SGD] |
| Description(s) found:
Found 39 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 440 amino acids |
Gene Ontology: |
|
| Cellular Component: |
retrotransposon nucleocapsid
[ISS ]
|
| Biological Process: |
transposition, RNA-mediated
[ISS]
|
| Molecular Function: |
RNA binding
[ISS]
protein binding [ISS ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MESQQLSQHS PISHGSACAS VTSKEVHTNQ DPLDVSASKT EECEKASTKA NSQQTTTPAS 60
61 SAVPENPHHA SPQTAQSHSP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120
121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180
181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240
241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300
301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360
361 RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420
421 TTEPIQLNNK HDLHLRPETY |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Krogan NJ, et al. (2006) |
|
YPR137C-A, YAR010C YPT10 |
| View Details | Qiu et al. (2008) |
|
YDR210C-C YDR210C-D YER160C YJR027W YJR028W YLR227W-A, YML04... YOR343W-A YOR343W-B YPR137C-A, YAR010C |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | cac1: TAP-tagged | Green EM, et al (2005) | |
| View Run | No Comments | Schneider, DA, et al. (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..157] |  |
67.318759 | No description for PF01021.9 was found. No confident structure predictions are available. |
| 2 | View Details | [158..329] | |
3.140988 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [330..440] | |
1.014977 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)