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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPA135
Protein Desc: RNA polymerase I second largest subunit A135
Sequence Coverage: 42.1%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSKVIKPPGQ ARTADFRTLE RESRFINPPK DKSAFPLLQE AVQPHIGSFN ALTEGPDGGL  60
   61  LNLGVKDIGE KVIFDGKPLN SEDEISNSGY LGNKLSVSVE QVSIAKPMSN DGVSSAVERK 120
  121  VYPSESRQRL TSYRGKLLLK LKWSVNNGEE NLFEVRDCGG LPVMLQSNRC HLNKMSPYEL 180
  181  VQHKEESDEI GGYFIVNGIE KLIRMLIVQR RNHPMAIIRP SFANRGASYS HYGIQIRSVR 240
  241  PDQTSQTNVL HYLNDGQVTF RFSWRKNEYL VPVVMILKAL CHTSDREIFD GIIGNDVKDS 300
  301  FLTDRLELLL RGFKKRYPHL QNRTQVLQYL GDKFRVVFQA SPDQSDLEVG QEVLDRIVLV 360
  361  HLGKDGSQDK FRMLLFMIRK LYSLVAGECS PDNPDATQHQ EVLLGGFLYG MILKEKIDEY 420
  421  LQNIIAQVRM DINRGMAINF KDKRYMSRVL MRVNENIGSK MQYFLSTGNL VSQSGLDLQQ 480
  481  VSGYTVVAEK INFYRFISHF RMVHRGSFFA QLKTTTVRKL LPESWGFLCP VHTPDGSPCG 540
  541  LLNHFAHKCR ISTQQSDVSR IPSILYSLGV APASHTFAAG PSLCCVQIDG KIIGWVSHEQ 600
  601  GKIIADTLRY WKVEGKTPGL PIDLEIGYVP PSTRGQYPGL YLFGGHSRML RPVRYLPLDK 660
  661  EDIVGPFEQV YMNIAVTPQE IQNNVHTHVE FTPTNILSIL ANLTPFSDFN QSPRNMYQCQ 720
  721  MGKQTMGTPG VALCHRSDNK LYRLQTGQTP IVKANLYDDY GMDNFPNGFN AVVAVISYTG 780
  781  YDMDDAMIIN KSADERGFGY GTMYKTEKVD LALNRNRGDP ITQHFGFGND EWPKEWLEKL 840
  841  DEDGLPYIGT YVEEGDPICA YFDDTLNKTK IKTYHSSEPA YIEEVNLIGD ESNKFQELQT 900
  901  VSIKYRIRRT PQIGDKFSSR HGQKGVCSRK WPTIDMPFSE TGIQPDIIIN PHAFPSRMTI 960
  961  GMFVESLAGK AGALHGIAQD STPWIFNEDD TPADYFGEQL AKAGYNYHGN EPMYSGATGE1020
 1021  ELRADIYVGV VYYQRLRHMV NDKFQVRSTG PVNSLTMQPV KGRKRHGGIR VGEMERDALI1080
 1081  GHGTSFLLQD RLLNSSDYTQ ASVCRECGSI LTTQQSVPRI GSISTVCCRR CSMRFEDAKK1140
 1141  LLTKSEDGEK IFIDDSQIWE DGQGNKFVGG NETTTVAIPF VLKYLDSELS AMGIRLRYNV1200
 1201  EPK

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 7.6109 0.5732 3492.21 11402.5 1 31.8 3 K.SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVK.D
[No Spectrum] 5.4376 0.404 4034.35 7535.2 1 23.7 1 K.SAFPLLQEAVQPHIGSFNALTEGPDGGLLNLGVKDIGEK.V
[No Spectrum] 4.9412 0.4118 2497.76 5050.3 1 52.3 3 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 4.6985 0.3451 2497.92 7970.2 1 34.1 1 K.VIFDGKPLNSEDEISNSGYLGNK.L
[No Spectrum] 4.2443 0.4198 2590.79 9096.5 1 31.2 3 K.LSVSVEQVSIAKPMSNDGVSSAVER.K
[No Spectrum] 4.1506 0.4626 1694.07 8517.3 1 73.1 1 K.WSVNNGEENLFEVR.D
[No Spectrum] 3.7248 0.281 1448.76 4068.2 1 75.0 1 R.DCGGLPVMLQSNR.C
[No Spectrum] 3.2679 0.3333 1353.72 8203.3 1 68.2 1 R.GASYSHYGIQIR.S
[No Spectrum] 3.0482 0.1769 1165.17 4631.8 1 83.3 1 R.TQVLQYLGDK.F
[No Spectrum] 5.2708 0.5006 2331.59 8502.4 1 62.5 1 R.VVFQASPDQSDLEVGQEVLDR.I
[No Spectrum] 5.5412 0.4692 3230.86 7973.5 1 32.5 1 R.IPSILYSLGVAPASHTFAAGPSLCCVQIDGK.I
[No Spectrum] 4.6578 0.5133 1925.76 6343.5 1 55.9 6 K.TPGLPIDLEIGYVPPSTR.G
[No Spectrum] 3.4789 0.4575 1824.56 8020.3 1 50.0 1 T.PGLPIDLEIGYVPPSTR.G
[No Spectrum] 3.8271 0.4451 1553.23 7602.2 1 65.4 19 R.GQYPGLYLFGGHSR.M
[No Spectrum] 3.0844 0.3736 1872.24 7208.6 1 37.5 1 K.QTMGTPGVALCHRSDNK.L
[No Spectrum] 3.4025 0.3612 1582.62 7634.3 2 57.7 1 K.SADERGFGYGTMYK.T
[No Spectrum] 5.132 0.3706 2722.62 8412.4 1 33.7 2 K.SADERGFGYGTMYKTEKVDLALNR.N
[No Spectrum] 3.6523 0.4937 1805.19 7116.5 1 53.3 1 R.NRGDPITQHFGFGNDE.W
[No Spectrum] 5.0905 0.4897 2496.63 6601.2 1 61.9 1 K.TYHSSEPAYIEEVNLIGDESNK.F
[No Spectrum] 5.5341 0.4494 3671.12 6194.8 1 30.6 3 K.TYHSSEPAYIEEVNLIGDESNKFQELQTVSIK.Y
[No Spectrum] 3.1351 0.1801 1193.58 4596.4 3 83.3 1 K.FQELQTVSIK.Y
[No Spectrum] 4.629 0.4598 3208.43 9010.8 1 25.9 1 R.KWPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 6.5811 0.4726 3082.18 7070.7 1 35.6 1 K.WPTIDMPFSETGIQPDIIINPHAFPSR.M
[No Spectrum] 4.3432 0.4032 1384.99 6270.2 1 75.0 2 R.MTIGMFVESLAGK.A
[No Spectrum] 6.1301 0.3552 3480.35 6800.2 1 33.1 1 K.AGALHGIAQDSTPWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 5.582 0.5131 2359.24 5897.7 1 63.2 2 T.PWIFNEDDTPADYFGEQLAK.A
[No Spectrum] 3.6177 0.3064 1459.4 8548.8 1 73.1 1 R.STGPVNSLTMQPVK.G
[No Spectrum] 3.2841 0.3666 1671.66 5889.9 1 53.3 1 R.STGPVNSLTMQPVKGR.K
[No Spectrum] 3.9532 0.4499 1801.01 8756.2 1 46.9 1 R.STGPVNSLTMQPVKGRK.R
[No Spectrum] 4.4033 0.5014 1644.0 7593.6 1 67.9 1 R.DALIGHGTSFLLQDR.L
[No Spectrum] 5.4524 0.5097 3172.06 8553.7 1 29.6 4 R.LLNSSDYTQASVCRECGSILTTQQSVPR.I
[No Spectrum] 3.103 0.448 1153.47 5995.4 1 83.3 1 R.IGSISTVCCR.R
[No Spectrum] 6.7666 0.4815 2966.3 9362.6 1 38.0 2 K.LLTKSEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 5.3784 0.3802 2511.34 5929.8 1 40.5 2 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 4.745 0.3213 2511.82 8189.2 1 50.0 2 K.SEDGEKIFIDDSQIWEDGQGNK.F
[No Spectrum] 4.9923 0.4075 1865.38 9290.3 1 70.0 2 K.IFIDDSQIWEDGQGNK.F
[No Spectrum] 5.1343 0.3952 1794.69 7669.6 1 68.8 16 K.FVGGNETTTVAIPFVLK.Y
[No Spectrum] 4.6141 0.3969 1355.53 7885.5 1 81.8 2 K.YLDSELSAMGIR.L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle