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Protein Overview: YEL007W

General Information:
Name(s) found: YEL007W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Putative protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 666 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIEPTFKGY IEDEDDALLI LQATLDGKLK HIPRRPYEIE RPYLIVSGSI FVFIEEISGI  60
   61 KRWTDGVSWS PSRISGKFLI YKELDKENAG SNANATSSGS TDSAVITDGT SGARNNPSSS 120
  121 KIKLPPLKNH QFDLPPTMGH SSFESEQDTS ISPSNRSNLP LKYTGLVKKT ISVKLKRPPF 180
  181 NSIENLHIVS YYSVKDIKQN CLVTPKASPF LKDVRPSQEL IVAMGNTTLG NVKNNSTTTG 240
  241 NGPNNINNKS NSSTPLNTVI STNNNSANIN AAGSNQFTSA NKNYYYKNDE SSGYPITQFA 300
  301 PALPSTTLMY TANPPYITQS PDNTNATGMN THVNNNNNNS NNSSNSNNSN NNNNNNNNNN 360
  361 NNNNNNINNI NNVNTNAGNG NNPNRFHNAS FAYNTTGDFI NPQQQGQISY PFYYTTIPIN 420
  421 NPNYYTTQPP NPVTNASTNE NQGYSTSSTQ HPYYGHPTES QSASAAAGAT GTPGTAENVL 480
  481 PVSSMQPLLH QANNNSASSA TSTAPYPVYS MNVNVPYYNS SASAYKRAQE NTTSNTNAEP 540
  541 SGATSTNSGT MLSNPAYANS QYTPSQVYYQ GFPQYAMASA QNPSMYQHQH QHPLPTVYPI 600
  601 ATPQQNIMSS GHTLSTIGSD PQHHHYQQEP NDHKNFAMGH ANNNILNITN NDTMNNLNTN 660
  661 TSTTTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YEL007W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] MSA 2.007968 View MSA. No confident structure predictions are available.
    2 View Details [112..249] ab initio 9.16 No description for 1l8mA was found.
    3 View Details [250..614] ab initio 7.12 No description for 1i3qA was found.
    4 View Details [615..666] deduced N/A Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle