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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: DEF1
Protein Desc: RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...
Sequence Coverage: 27.5%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSTQFRKSNH NSHSSKKLNP ALKSKIDTLT ELFPDWTSDD LIDIVQEYDD LETIIDKITS  60
   61  GAVTRWDEVK KPAKKEKYEK KEQQHSYVPQ QHLPNPEDDI TYKSSNNSNS FTSTKHNSSN 120
  121  NYTQARNKKK VQTPRAHTTG KHVNLDKGKH VPSKPVSNTT SWAAAVSVDT KHDVPQDSND 180
  181  NNNEELEAQG QQAQEKNQEK EQEEQQQQEG HNNKEEHKQI EQPSLSSKKT TSRTSASQPK 240
  241  KMSWAAIATP KPKAVKKTES PLENVAELKK EISDIKKDDQ KSEASEEKVN EQETSAQEQE 300
  301  EETAEPSEEN EDRVPEVDGE EVQEEAEKKE QVKEEEQTAE ELEQEQDNVA APEEEVTVVE 360
  361  EKVEISAVIS EPPEDQANTV PQPQQQSQQP QQPQQPQQPQ QPQQPQQQQQ PQQPQQPQQQ 420
  421  LQQQQQQQQQ PVQAQAQAQE EQLSQNYYTQ QQQQQYAQQQ HQLQQQYLSQ QQQYAQQQQQ 480
  481  HPQPQSQQPQ SQQSPQSQKQ GNNVAAQQYY MYQNQFPGYS YPGMFDSQGY AYGQQYQQLA 540
  541  QNNAQTSGNA NQYNFQQGYG QAGANTAAAN LTSAAAAAAA SPATAHAQPQ QQQPYGGSFM 600
  601  PYYAHFYQQS FPYGQPQYGV AGQYPYQLPK NNYNYYQTQN GQEQQSPNQG VAQHSEDSQQ 660
  661  KQSQQQQQQQ PQGQPQPEVQ MQNGQPVNPQ QQMQFQQYYQ FQQQQQQAAA AAAAAAQQGV 720
  721  PYGYNGYDYN SKNSRGFY

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 5.6132 0.452 4001.22 9237.2 1 25.8 2 K.SKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 4.0333 0.3083 2456.17 6552.1 2 47.5 1 W.TSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 4.0714 0.3485 3218.22 6593.2 2 26.0 1 K.YEKKEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 3.6479 0.3885 2794.98 7563.8 1 38.6 1 K.KEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 4.9343 0.3689 2797.35 4633.5 1 38.6 1 K.KEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 3.9092 0.461 2666.86 6012.8 1 40.5 2 K.EQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 3.7979 0.2839 2667.57 5626.0 1 36.9 2 K.EQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 4.7609 0.467 2546.89 6255.3 1 38.6 1 K.SSNNSNSFTSTKHNSSNNYTQAR.N
[No Spectrum] 4.6053 0.3878 2547.28 9396.6 1 31.8 1 K.SSNNSNSFTSTKHNSSNNYTQAR.N
[No Spectrum] 3.0017 0.299 2282.69 5364.7 1 52.4 1 K.HVPSKPVSNTTSWAAAVSVDTK.H
[No Spectrum] 5.5063 0.3809 2840.36 8009.7 1 36.5 1 K.HDVPQDSNDNNNEELEAQGQQAQEK.N
[No Spectrum] 5.8994 0.4258 1945.62 7852.0 1 78.1 1 N.DNNNEELEAQGQQAQEK.N
[No Spectrum] 4.4869 0.4244 1884.19 9071.3 1 59.4 3 K.AVKKTESPLENVAELKK.E
[No Spectrum] 5.5558 0.3894 1886.97 10455.0 1 48.4 3 K.AVKKTESPLENVAELKK.E
[No Spectrum] 3.9023 0.259 1458.56 7418.5 1 79.2 1 K.KTESPLENVAELK.K
[No Spectrum] 4.7414 0.3945 1586.69 8768.4 1 80.8 2 K.KTESPLENVAELKK.E
[No Spectrum] 3.6959 0.1873 1588.99 5895.1 1 46.2 2 K.KTESPLENVAELKK.E
[No Spectrum] 3.4513 0.3723 1459.94 6986.0 1 70.8 1 K.TESPLENVAELKK.E
[No Spectrum] 4.6212 0.4479 2908.11 8433.7 1 31.2 1 K.VNEQETSAQEQEEETAEPSEENEDR.V
[No Spectrum] 2.0159 0.1816 975.98 5523.4 19 57.1 1 E.PSEENEDR.V
[No Spectrum] 4.6961 0.3567 3613.62 9578.6 1 33.3 1 K.NNYNYYQTQNGQEQQSPNQGVAQHSEDSQQK.Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle