| General Information: |
|
| Name(s) found: |
RPB4 /
YJL140W
[SGD]
|
| Description(s) found:
Found 71 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 221 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IDA ]
cytoplasm [IDA ]
cytoplasmic mRNA processing body [IDA ]
DNA-directed RNA polymerase II, core complex [TAS ]
|
| Biological Process: |
mRNA export from nucleus
[IMP]
telomere maintenance [IMP ]
transcription from RNA polymerase II promoter [TAS ]
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [IMP ]
|
| Molecular Function: |
DNA-directed RNA polymerase activity
[TAS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MNVSTSTFQT RRRRLKKVEE EENAATLQLG QEFQLKQINH QGEEEELIAL NLSEARLVIK 60
61 EALVERRRAF KRSQKKHKKK HLKHENANDE TTAVEDEDDD LDEDDVNADD DDFMHSETRE 120
121 KELESIDVLL EQTTGGNNKD LKNTMQYLTN FSRFRDQETV GAVIQLLKST GLHPFEVAQL 180
181 GSLACDTADE AKTLIPSLNN KISDDELERI LKELSNLETL Y |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
DST1 IWR1 RPB10 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPO21 RPO26 SPT4 SPT5 TAF14 TFG1 TFG2 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
CDC73 RPB10 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPC10 RPO21 RPO26 |
| View Details | Krogan NJ, et al. (2006) |
|
ALG3 BUD27 CBF2 DST1 ESS1 IWR1 RPB10 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPO21 RPO26 SPT4 TAF14 TFG1 TFG2 YBL059W YBR259W YPL225W |
| View Details | Gavin AC, et al. (2006) |
|
IWR1 RPB11 RPB2 RPB3 RPB4 RPB7 RPB9 TFG1 TFG2 |
| View Details | Gavin AC, et al. (2002) |
|
ABD1 AOS1 IWR1 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPO21 RPO26 SPT4 SPT5 TAF14 TFG1 TFG2 |
| View Details | Qiu et al. (2008) |
|
DCP1 DCP2 DCS1 DCS2 RPA12 RPB10 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPC10 RPC17 RPC19 RPC25 RPC31 RPC37 RPC40 RPO21 RPO26 SRB4 SRB5 SRB7 TAF10 TAF14 TFG1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..122] |  |
28.552842 | RNA polymerase Rpb4 No confident structure predictions are available. |
| 2 | View Details | [123..221] | |
7.54 | RNA polymerase II subunit RBP7 (RpoF) |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)