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Protein Overview: RPC40

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) Manuscript in preparation. RET1 RPA12 RPA135 RPA14 RPA190 RPA34 RPA43 RPA49 RPB10 RPB5 RPB8 RPC10 RPC11 RPC17 RPC19 RPC25 RPC31 RPC34 RPC37 RPC40 RPC53 RPC82 RPO26 RPO31
View Details (MIPS) Mewes HW, et al. (2004) RET1 RPA12 RPA135 RPA14 RPA190 RPA34 RPA43 RPA49 RPB10 RPB5 RPB8 RPC10 RPC19 RPC25 RPC31 RPC34 RPC40 RPC82 RPO26 RPO31
View Details Krogan NJ, et al. (2006) BDP1 CDC14 COY1 FAR7 MAF1 RET1 RPA12 RPA135 RPA14 RPA190 RPA34 RPA43 RPA49 RPC10 RPC11 RPC17 RPC19 RPC25 RPC31 RPC34 RPC37 RPC40 RPC53 RPC82 RPO31 YDL144C YIR024C
View Details Gavin AC, et al. (2006) RET1 RPA12 RPA190 RPA43 RPA49 RPC25 RPC31 RPC34 RPC37 RPC40 RPC53 RPC82 RPO31
View Details Gavin AC, et al. (2002) ACT1 ADE5,7 ADH1 AMS1 ARP4 ARP8 ASC1 BDF2 CDC14 CDC55 CKB1 DHH1 DYN1 ECM5 ESC8 FBA1 GCN1 GLY1 HAT1 HAT2 HHF2, HHF1 HIF1 HSM3 ICL1 IES1 IES5 IML1 INO80 IOC3 ISW1 ISW2 ITC1 KAP123 KRE33 LIP2 MAC1 MAF1 MDN1 MIS1 MOT1 MSB1 NHP10 NHP6B, YBR090C-A NIP1 NMD5 NPL6 PDC1 PFK1 PRO1 PRT1 PSD2 PSE1 PSH1 REB1 RET1 RFA1 RFX1 RNR2 RPA12 RPA135 RPA190 RPA43 RPA49 RPB10 RPB5 RPB8 RPC11 RPC17 RPC19 RPC25 RPC31 RPC34 RPC37 RPC40 RPC53 RPC82 RPG1 RPN12 RPN3 RPN6 RPN8 RPN9 RPO26 RPO31 RPT2 RPT3 RPT5 RPT6 RSC2 RSC3 RSC4 RSC58 RSC6 RSC8 RVB2 SAM1 SFH1 SIN3 SPT15 SRO7 STH1 STO1 TAF1 TEL1 TFC7 TOP1 TSC11 USO1 UTP20 VPS1 VTH2 YFR006W YPR077C
View Details Ho Y, et al. (2002) ACC1 ACH1 ADH2 ADR1 AHA1 AIM13 ARF1 ARF2 ARO4 ARP2 CDC60 CLU1 DOP1 ECM29 FET3 GCD11 GFA1 GND1 GUS1 HEM15 IDH1 IDH2 ILS1 ISA2 KAP122 KRI1 MDH1 MET18 NGL2 NTG1 PPE1 PPH21 PPH22 PRB1 PYC1 PYC2 RET1 RFC2 RPA12 RPA135 RPA190 RPA49 RPB5 RPC19 RPC25 RPC34 RPC40 RPC82 RPN3 RPO26 RPO31 RTS1 RTS3 RVS167 SEC27 SMC4 SRY1 TAP42 TBS1 TFP1 TIF34 TPD3 TRP5 TSA2 URE2 VMA4 YER138C YFL042C YHR112C
View Details Qiu et al. (2008) RET1 RPA12 RPA135 RPA14 RPA190 RPA34 RPA43 RPA49 RPB10 RPB11 RPB2 RPB3 RPB4 RPB5 RPB7 RPB8 RPB9 RPC10 RPC11 RPC17 RPC19 RPC25 RPC31 RPC34 RPC37 RPC40 RPC53 RPC82 RPO21 RPO26 RPO31

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RLF2 cac1: TAP-tagged Green EM, et al (2005)
View Run DAD1 Dam1 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen RPC19 RPC40 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RPC40 Huh WK, et al. (2003)
View Data RPC40 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..229]
[295..335]
PSI-BLAST 228.211549 RPB3
2 View Details [230..294] PSI-BLAST 228.211549 RPB3




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.99

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle