YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
DPB2
  • replication fork
  • nucleus
  • cytoplasm
  • epsilon DNA polymerase complex
  • lagging strand elongation
  • leading strand elongation
  • nucleotide-excision repair
  • mismatch repair
  • DNA binding
  • nucleotidyltransferase activity
  • DNA-directed DNA polymerase activity
  • double-stranded DNA binding
  • transferase activity
  • DPB4
  • chromatin accessibility complex
  • epsilon DNA polymerase complex
  • lagging strand elongation
  • leading strand elongation
  • chromatin silencing at telomere
  • DNA binding
  • nucleotidyltransferase activity
  • DNA-directed DNA polymerase activity
  • double-stranded DNA binding
  • transferase activity
  • ISW1
  • ISW1 complex
  • chromatin remodeling
  • RNA elongation
  • ATPase activity
  • ISW2
  • nucleus
  • chromatin accessibility complex
  • negative regulation of transcription from RNA polymerase II promoter by pheromones
  • chromatin remodeling
  • nucleosome positioning
  • chromatin silencing at telomere
  • ATPase activity
  • KAP114
  • nucleus
  • cytoplasm
  • protein import into nucleus
  • protein transmembrane transporter activity
  • MOT1
  • mitochondrion
  • nuclear chromosome
  • nuclear outer membrane
  • transcription of nuclear rRNA large RNA polymerase I transcript
  • regulation of RNA polymerase II transcriptional preinitiation complex assembly
  • regulation of transcription from RNA polymerase II promoter
  • ATPase activity
  • rDNA binding
  • TATA-binding protein binding
  • NAP1
  • nucleus
  • cytoplasm
  • nuclear nucleosome
  • M phase of mitotic cell cycle
  • budding cell bud growth
  • nucleosome assembly
  • histone binding
  • NPL6
  • nucleus
  • RSC complex
  • chromatin remodeling
  • protein import into nucleus
  • ATP-dependent chromatin remodeling
  • telomere maintenance
  • response to DNA damage stimulus
  • DNA-dependent ATPase activity
  • POL2
  • replication fork
  • epsilon DNA polymerase complex
  • lagging strand elongation
  • leading strand elongation
  • nucleotide-excision repair
  • mismatch repair
  • DNA synthesis involved in DNA repair
  • chromatin silencing at telomere
  • nucleotide binding
  • nucleic acid binding
  • DNA binding
  • zinc ion binding
  • DNA-directed DNA polymerase activity
  • nucleotidyltransferase activity
  • metal ion binding
  • double-stranded DNA binding
  • transferase activity
  • PUF6
  • nucleus
  • nucleolus
  • regulation of transcription, mating-type specific
  • ribosome biogenesis
  • mRNA binding
  • specific transcriptional repressor activity
  • RET1
  • DNA-directed RNA polymerase III complex
  • transcription from RNA polymerase III promoter
  • DNA-directed RNA polymerase activity
  • RPA135
  • DNA-directed RNA polymerase I complex
  • transcription from RNA polymerase I promoter
  • ribosome biogenesis
  • DNA-directed RNA polymerase activity
  • RPC82
  • DNA-directed RNA polymerase III complex
  • transcription from RNA polymerase III promoter
  • ribosome biogenesis
  • DNA-directed RNA polymerase activity
  • RPO31
  • DNA-directed RNA polymerase III complex
  • transcription from RNA polymerase III promoter
  • DNA-directed RNA polymerase activity
  • STH1
  • RSC complex
  • cytoskeleton organization
  • ATP-dependent chromatin remodeling
  • chromosome segregation
  • chromatin remodeling at centromere
  • meiosis
  • double-strand break repair
  • ATPase activity
  • DNA-dependent ATPase activity
  • TOP1
  • nucleus
  • nucleolus
  • mitotic chromosome condensation
  • chromatin silencing at rDNA
  • DNA strand elongation involved in DNA replication
  • nuclear migration
  • regulation of mitotic recombination
  • chromatin assembly or disassembly
  • DNA topological change
  • regulation of transcription from RNA polymerase II promoter
  • RNA elongation from RNA polymerase II promoter
  • DNA topoisomerase type I activity
  • VPS1
  • membrane fraction
  • peroxisome
  • cytoplasm
  • mitochondrial outer membrane
  • protein retention in Golgi apparatus
  • peroxisome organization
  • vacuolar transport
  • protein targeting to vacuole
  • actin cytoskeleton organization
  • GTPase activity
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    nuclear part 4.0003E-10 17 1103 15 6292
    epsilon DNA polymerase complex 1.6332E-7 17 5 3 6292
    nucleus 1.7093E-7 17 2041 16 6292
    intracellular organelle part 9.7262E-7 17 2282 16 6292
    organelle part 9.7262E-7 17 2282 16 6292
    DNA-directed RNA polymerase complex 1.0976E-6 17 31 4 6292
    RNA polymerase complex 1.0976E-6 17 31 4 6292
    nuclear DNA-directed RNA polymerase complex 1.0976E-6 17 31 4 6292
    DNA polymerase complex 1.9436E-6 17 10 3 6292
    chromatin remodeling complex 4.6416E-6 17 99 5 6292
    DNA-directed RNA polymerase III complex 1.0886E-5 17 17 3 6292
    replisome 1.3041E-5 17 18 3 6292
    nuclear replisome 1.3041E-5 17 18 3 6292
    protein-DNA complex 1.3198E-5 17 57 4 6292
    nuclear replication fork 1.8158E-5 17 20 3 6292
    nucleotide-excision repair complex 2.1149E-5 17 21 3 6292
    protein complex 2.728E-5 17 1137 11 6292
    chromatin accessibility complex 4.1099E-5 17 4 2 6292
    macromolecular complex 1.4652E-4 17 1635 12 6292
    membrane-bounded organelle 1.6371E-4 17 3771 17 6292
    intracellular membrane-bounded organelle 1.6371E-4 17 3771 17 6292
    replication fork 1.7625E-4 17 42 3 6292
    nuclear chromosome 2.5887E-4 17 228 5 6292
    intracellular organelle 6.0057E-4 17 4070 17 6292
    organelle 6.0308E-4 17 4071 17 6292
    chromosome 6.066E-4 17 274 5 6292
    nuclear lumen 8.4055E-4 17 453 6 6292
    RSC complex 1.2688E-3 17 20 2 6292
    nuclear chromosome part 1.4079E-3 17 190 4 6292
    non-membrane-bounded organelle 1.902E-3 17 959 8 6292
    intracellular non-membrane-bounded organelle 1.902E-3 17 959 8 6292
    chromosomal part 3.1703E-3 17 237 4 6292
    organelle lumen 5.8444E-3 17 660 6 6292
    intracellular organelle lumen 5.8444E-3 17 660 6 6292
    membrane-enclosed lumen 7.8098E-3 17 700 6 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    transcription, DNA-dependent 6.0978E-9 17 503 11 6292
    RNA biosynthetic process 6.7741E-9 17 508 11 6292
    transcription 1.6347E-8 17 552 11 6292
    nucleic acid metabolic process 2.7189E-7 17 1415 14 6292
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 1.0381E-6 17 1566 14 6292
    DNA strand elongation 1.0976E-6 17 31 4 6292
    DNA strand elongation involved in DNA replication 1.0976E-6 17 31 4 6292
    cellular macromolecule biosynthetic process 4.6681E-6 17 1187 12 6292
    RNA metabolic process 4.7296E-6 17 954 11 6292
    macromolecule biosynthetic process 4.7554E-6 17 1189 12 6292
    cellular nitrogen compound metabolic process 5.1462E-6 17 1770 14 6292
    nitrogen compound metabolic process 5.9975E-6 17 1791 14 6292
    leading strand elongation 7.3081E-6 17 15 3 6292
    chromatin organization 9.6313E-6 17 203 6 6292
    lagging strand elongation 1.3041E-5 17 18 3 6292
    chromatin remodeling 2.6716E-5 17 68 4 6292
    DNA-dependent DNA replication 5.6059E-5 17 82 4 6292
    DNA packaging 7.7434E-5 17 32 3 6292
    gene expression 8.8854E-5 17 1283 11 6292
    cellular biosynthetic process 9.3713E-5 17 1567 12 6292
    chromatin assembly or disassembly 1.0167E-4 17 35 3 6292
    biosynthetic process 1.1829E-4 17 1602 12 6292
    negative regulation of gene expression, epigenetic 1.2197E-4 17 100 4 6292
    gene silencing 1.2197E-4 17 100 4 6292
    regulation of gene expression, epigenetic 1.2197E-4 17 100 4 6292
    chromatin silencing 1.2197E-4 17 100 4 6292
    transcription from RNA polymerase III promoter 1.3039E-4 17 38 3 6292
    cellular macromolecule metabolic process 1.3415E-4 17 2285 14 6292
    macromolecule metabolic process 1.8936E-4 17 2349 14 6292
    regulation of transcription, DNA-dependent 2.3553E-4 17 358 6 6292
    regulation of RNA metabolic process 2.5413E-4 17 363 6 6292
    DNA replication 2.7177E-4 17 123 4 6292
    regulation of transcription 3.4543E-4 17 384 6 6292
    chromatin silencing at telomere 3.9412E-4 17 55 3 6292
    DNA conformation change 4.6122E-4 17 58 3 6292
    regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 5.2585E-4 17 415 6 6292
    regulation of nitrogen compound metabolic process 5.3271E-4 17 416 6 6292
    negative regulation of transcription, DNA-dependent 6.8898E-4 17 157 4 6292
    negative regulation of RNA metabolic process 7.057E-4 17 158 4 6292
    regulation of gene expression 7.6444E-4 17 445 6 6292
    negative regulation of transcription 8.1213E-4 17 164 4 6292
    negative regulation of gene expression 8.1213E-4 17 164 4 6292
    regulation of macromolecule biosynthetic process 8.7058E-4 17 456 6 6292
    chromatin modification 8.8913E-4 17 168 4 6292
    negative regulation of macromolecule biosynthetic process 1.0362E-3 17 175 4 6292
    regulation of cellular biosynthetic process 1.0452E-3 17 472 6 6292
    regulation of biosynthetic process 1.057E-3 17 473 6 6292
    chromatin assembly 1.1437E-3 17 19 2 6292
    negative regulation of nitrogen compound metabolic process 1.1512E-3 17 180 4 6292
    negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 1.1512E-3 17 180 4 6292
    regulation of macromolecule metabolic process 1.2461E-3 17 488 6 6292
    negative regulation of biosynthetic process 1.3806E-3 17 189 4 6292
    negative regulation of cellular biosynthetic process 1.3806E-3 17 189 4 6292
    negative regulation of macromolecule metabolic process 1.4637E-3 17 192 4 6292
    regulation of primary metabolic process 1.6355E-3 17 514 6 6292
    negative regulation of cellular metabolic process 2.0026E-3 17 209 4 6292
    regulation of cellular metabolic process 2.0334E-3 17 536 6 6292
    negative regulation of metabolic process 2.0381E-3 17 210 4 6292
    ATP-dependent chromatin remodeling 2.1497E-3 17 26 2 6292
    regulation of metabolic process 2.2585E-3 17 547 6 6292
    mismatch repair 2.318E-3 17 27 2 6292
    primary metabolic process 2.4078E-3 17 2896 14 6292
    chromosome organization 2.4338E-3 17 555 6 6292
    cellular process 2.5051E-3 17 4426 17 6292
    cellular response to stimulus 2.6129E-3 17 379 5 6292
    nucleosome organization 2.6727E-3 17 29 2 6292
    regulation of RNA polymerase II transcriptional preinitiation complex assembly 2.7018E-3 17 1 1 6292
    regulation of transcription initiation from RNA polymerase II promoter 2.7018E-3 17 1 1 6292
    RNA polymerase II transcriptional preinitiation complex assembly 2.7018E-3 17 1 1 6292
    transcription of nuclear rRNA large RNA polymerase I transcript 2.7018E-3 17 1 1 6292
    transcriptional preinitiation complex assembly 2.7018E-3 17 1 1 6292
    transcription from RNA polymerase I promoter 2.8591E-3 17 30 2 6292
    response to DNA damage stimulus 3.122E-3 17 236 4 6292
    DNA metabolic process 3.1865E-3 17 585 6 6292
    negative regulation of cellular process 3.8456E-3 17 250 4 6292
    negative regulation of biological process 4.0145E-3 17 253 4 6292
    cellular metabolic process 4.1361E-3 17 3033 14 6292
    nucleotide-excision repair 4.5622E-3 17 38 2 6292
    protein-DNA complex assembly 4.8012E-3 17 39 2 6292
    chromatin remodeling at centromere 5.3968E-3 17 2 1 6292
    RNA elongation 6.3538E-3 17 45 2 6292
    cellular response to stress 6.5321E-3 17 290 4 6292
    metabolic process 6.562E-3 17 3157 14 6292
    protein localization in organelle 6.9354E-3 17 149 3 6292
    protein localization in nucleus 7.2051E-3 17 48 2 6292
    protein import into nucleus 7.2051E-3 17 48 2 6292
    nuclear import 7.2051E-3 17 48 2 6292
    cellular component biogenesis 7.4875E-3 17 694 6 6292
    rRNA transcription 8.0849E-3 17 3 1 6292
    nucleosome positioning 8.0849E-3 17 3 1 6292
    biological regulation 8.6353E-3 17 1213 8 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    nucleotidyltransferase activity 1.3262E-7 17 168 7 6292
    RNA polymerase activity 1.6097E-6 17 34 4 6292
    DNA-directed RNA polymerase activity 1.6097E-6 17 34 4 6292
    double-stranded DNA binding 2.8067E-5 17 23 3 6292
    transferase activity, transferring phosphorus-containing groups 6.0753E-5 17 420 7 6292
    catalytic activity 6.2355E-5 17 2150 14 6292
    nucleoside-triphosphatase activity 1.4788E-4 17 329 6 6292
    ATPase activity 1.7999E-4 17 211 5 6292
    structure-specific DNA binding 2.0266E-4 17 44 3 6292
    hydrolase activity, acting on acid anhydrides 2.1803E-4 17 353 6 6292
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.1803E-4 17 353 6 6292
    pyrophosphatase activity 2.1803E-4 17 353 6 6292
    DNA binding 4.4356E-4 17 256 5 6292
    DNA-directed DNA polymerase activity 2.9573E-3 17 110 3 6292
    transferase activity 3.1347E-3 17 797 7 6292
    DNA polymerase activity 3.355E-3 17 115 3 6292
    TATA-binding protein binding 5.3968E-3 17 2 1 6292
    DNA topoisomerase type I activity 5.3968E-3 17 2 1 6292
    nucleic acid binding 6.1125E-3 17 666 6 6292
    DNA-dependent ATPase activity 9.3809E-3 17 55 2 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle