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Protein Overview: VPS13

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run TOR1 No Comments Reinke A, et al. (2004)
View Run TOR1 No Comments Reinke A, et al. (2004)
View Run LST8 No Comments Reinke A, et al. (2004)
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run KOG1 No Comments Reinke A, et al. (2004)
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run PAN1 No Comments Toshima J, et al (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen SEC17 VPS13 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data VPS13 and SNF7 Huh WK, et al. (2003)
View Data VPS13 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..394] MSA 5.024958 View MSA. No confident structure predictions are available.
2 View Details [395..473] deduced N/A No confident structure predictions are available.
3 View Details [474..863] MSA 1.016912 View MSA. No confident structure predictions are available.
4 View Details [864..1227] deduced N/A No confident structure predictions are available.
5 View Details [1228..1353] MSA 1.015977 View MSA. No confident structure predictions are available.
6 View Details [1354..1739] deduced N/A No confident structure predictions are available.
7 View Details [1740..1864] MSA 1.015982 View MSA. No confident structure predictions are available.
8 View Details [1865..2169] deduced N/A No confident structure predictions are available.
9 View Details [2170..2278] MSA 2.019983 View MSA. No confident structure predictions are available.
10 View Details [2279..2541] MSA 1.020955 View MSA. No confident structure predictions are available.
11 View Details [2542..2619] deduced N/A Confident ab initio structure predictions are available.
12 View Details [2620..3021] MSA 4.033932 View MSA. No confident structure predictions are available.
13 View Details [3022..3144] deduced N/A Confident ab initio structure predictions are available.




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.96

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle