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Protein Overview: TFA1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen SEC17 TFA1 1 Unpublished Fields Lab Data
View Screen RED1 TFA1 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TFA1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..219] Pfam 96.420216 TFIIE alpha subunit No confident structure predictions are available.
2 View Details [220..482] MSA 7.070997 View MSA. No confident structure predictions are available.
3 View Details [167..482] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 5.67074370996647 bayes_pls_golite062009
  • transcription regulator activity
  • 5.55329976718261 bayes_pls_golite062009
  • DNA binding
  • 4.84466441605416 bayes_pls_golite062009
  • nucleic acid binding
  • 4.57954522145536 bayes_pls_golite062009
  • transcription factor activity
  • 4.12685284895733 bayes_pls_golite062009
  • binding
  • 4.05190810999633 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.60738445921725 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.3918869755162 bayes_pls_golite062009
  • transcription activator activity
  • 2.37668609508629 bayes_pls_golite062009
  • transcription repressor activity
  • 2.22485867684613 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 1.82365519759474 bayes_pls_golite062009
  • RNA polymerase activity
  • 1.82365519759474 bayes_pls_golite062009
  • protein binding
  • 0.961087148890615 bayes_pls_golite062009
  • transcription factor binding
  • 0.85714789329232 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.66743181561551 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.237727660028553 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
  • 0.0360186926687502 bayes_pls_golite062009
    2
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 7.54088990789822 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 6.31798033897642 bayes_pls_golite062009
  • RNA polymerase activity
  • 6.31798033897642 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 3.73777657415367 bayes_pls_golite062009
  • transcription regulator activity
  • 3.36253105801209 bayes_pls_golite062009
  • binding
  • 2.58311326284197 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 2.03339710864117 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.95080397433956 bayes_pls_golite062009
  • nucleic acid binding
  • 1.8086747972572 bayes_pls_golite062009
  • DNA binding
  • 1.76634962183736 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.57988053581899 bayes_pls_golite062009
  • DNA primase activity
  • 1.01743034310838 bayes_pls_golite062009
  • protein binding
  • 0.764662055834369 bayes_pls_golite062009
  • catalytic activity
  • 0.434839928397784 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle