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Protein Overview: IMP3

General Information:
Name(s) found: IMP3 / YHR148W [SGD]
Description(s) found:
Found 31 descriptions.
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  • Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 183 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IMPLink to PubMed article]
    nuclear outer membrane [TASLink to PubMed article]
    small nucleolar ribonucleoprotein complex [IDALink to PubMed article]
    Biological Process: rRNA modification [TASLink to PubMed article]
    maturation of SSU-rRNA [IPILink to PubMed article]
    ribosome biogenesis [RCALink to PubMed article][TASLink to PubMed article]
    Molecular Function: snoRNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKLKHHEQ KLLKKVDFLE WKQDQGHRDT QVMRTYHIQN REDYHKYNRI CGDIRRLANK  60
   61 LSLLPPTDPF RRKHEQLLLD KLYAMGVLTT KSKISDLENK VTVSAICRRR LPVIMHRLKM 120
  121 AETIQDAVKF IEQGHVRVGP NLINDPAYLV TRNMEDYVTW VDNSKIKKTL LRYRNQIDDF 180
  181 DFS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) BFR2 BMS1 DIM1 DIP2 ECM16 EMG1 ENP1 ENP2 IMP3 IMP4 KRE33 KRR1 MPP10 NAN1 NOC4 NOP1 NOP14 NOP56 PNO1 PWP2 ROK1 RPS13 RRP9 SOF1 UTP10 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9
    View Details Gavin AC, et al. (2006) CMS1 IMP3
    View Details Gavin AC, et al. (2002) ADE4 ADH1 ASC1 BEM2 BFR2 BMS1 BRX1 BUD21 CBF5 CFT2 CKA1 CKA2 CKB1 CKB2 CMS1 DBP8 DIA4 DIM1 DIP2 DIS3 ECM16 ECM29 EMG1 ENP1 ENP2 ERO1 ESF1 ESF2 FAP7 FIP1 GCN1 GLC7 HAS1 HCA4 HHF1, HHF2 HRR25 HSL1 HTA2 IMP3 IMP4 KRE33 KRR1 LCP5 LTV1 MPP10 MRD1 MVD1 NAN1 NOB1 NOC2 NOC4 NOP1 NOP12 NOP14 NOP56 NOP58 NOP6 PAP1 PFS2 PNO1 PRE6 PRE9 PRP43 PTA1 PTI1 PWP2 RCL1 REF2 RIO2 RML2 RNA14 ROK1 RPP2B RRP12 RRP7 RRP9 RTG2 SAM1 SCL1 SEC21 SLX9 SNF2 SNF5 SOF1 SRO9 SWI3 TIF1, TIF2 TSR1 UTP10 UTP11 UTP13 UTP15 UTP18 UTP20 UTP21 UTP22 UTP30 UTP4 UTP6 UTP7 UTP8 UTP9 YGR054W YOR059C YSH1
    View Details Qiu et al. (2008) BUD21 DIP2 ENP1 FCF1 GAR1 IMP3 IMP4 LCP5 MPP10 NAN1 NHP2 PWP2 RPS14A RRP9 SNU13 SOF1 UTP11 UTP15 UTP20 UTP22 UTP23 UTP4 UTP5 UTP6 UTP7 UTP9

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen SWI5 IMP3 1 Unpublished Fields Lab Data
    View Screen PCF11 IMP3 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] PSI-BLAST 109.0 No description for 1k5xD_ was found.
    2 View Details [68..183] PSI-BLAST 109.0 No description for 1k5xD_ was found.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle