General Information: |
|
Name(s) found: |
RRP9 /
YPR137W
[SGD]
|
Description(s) found:
Found 23 descriptions. SHOW ALL |
|
Organism: | Saccharomyces cerevisiae |
Length: | 573 amino acids |
Gene Ontology: |
|
Cellular Component: |
nuclear outer membrane
[TAS]
small nuclear ribonucleoprotein complex [TAS] small nucleolar ribonucleoprotein complex [IPI][TAS] |
Biological Process: |
rRNA modification
[TAS]
maturation of SSU-rRNA [IPI] |
Molecular Function: |
snoRNA binding
[IPI]
|
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSDVTQQKKR KRSKGEVNPS KPTVDEEITD PSSNEDEQLE VSDEEDALES EEEFEGENPA 60 61 DKRRRLAKQY LENLKSEAND ILTDNRNAEE KDLNNLKERT IDEYNNFDAG DLDKDIIASR 120 121 LKEDVAEQQG RVFRYFGDKL LISEAKQSFT RVGENNLTCI SCFQPVLNKY TFEESSNGDK 180 181 NKGRLFAYTV SKDLQLTKYD ITDFSKRPKK LKYAKGGAKY IPTSKHEYEN TTEGHYDEIL 240 241 TVAASPDGKY VVTGGRDRKL IVWSTESLSP VKVIPTKDRR GEVLSLAFRK NSDQLYASCA 300 301 DFKIRTYSIN QFSQLEILYG HHDIVEDISA LAMERCVTVG ARDRTAMLWK IPDETRLTFR 360 361 GGDEPQKLLR RWMKENAKEG EDGEVKYPDE SEAPLFFCEG SIDVVSMVDD FHFITGSDNG 420 421 NICLWSLAKK KPIFTERIAH GILPEPSFND ISGETDEELR KRQLQGKKLL QPFWITSLYA 480 481 IPYSNVFISG SWSGSLKVWK ISDNLRSFEL LGELSGAKGV VTKIQVVESG KHGKEKFRIL 540 541 ASIAKEHRLG RWIANVSGAR NGIYSAVIDQ TGF |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
BAIT | PREY | HITS | PUBLICATION | |
View Screen | 1 | Unpublished Fields Lab Data | ||
View Screen | 1 | Unpublished Fields Lab Data | ||
View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
|
Huh WK, et al. (2003) |
View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..59] | N/A | No confident structure predictions are available. | |
2 | View Details | [60..140] | 129.68867 | Cdc4 F-box and linker domains; Cdc4 propeller domain | |
3 | View Details | [141..434] | 129.68867 | Cdc4 F-box and linker domains; Cdc4 propeller domain | |
4 | View Details | [435..502] | 123.927757 | Tup1, C-terminal domain | |
5 | View Details | [503..573] | N/A | Confident ab initio structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.75 |
Source: Reynolds et al. (2008)