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Protein Overview: TIF35

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TIF35 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..64] deduced N/A Confident ab initio structure predictions are available.
2 View Details [65..183] PSI-BLAST 78.0 Sex-lethal protein
3 View Details [184..274] PSI-BLAST 78.0 Sex-lethal protein

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • mRNA binding
  • 4.52007814408702 bayes_pls_golite062009
  • nucleic acid binding
  • 4.51665560478175 bayes_pls_golite062009
  • RNA binding
  • 4.50438526063124 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • translation initiation factor activity
  • 3.27900316559423 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • transcription regulator activity
  • 1.7776932219095 bayes_pls_golite062009
  • DNA binding
  • 1.65208390030564 bayes_pls_golite062009
  • 1.49431666307335 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.90573796517364 bayes_pls_golite062009
  • RNA cap binding
  • 0.847034036194541 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.824614388276642 bayes_pls_golite062009
  • transcription factor activity
  • 0.795084003256395 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.32812362201346 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.304235325881492 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle