General Information: |
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Name(s) found: |
TPA1 /
YER049W
[SGD]
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Description(s) found:
Found 27 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 644 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA![]() |
Biological Process: |
ribosome biogenesis
[RCA![]() translational readthrough [IMP ![]() mRNA catabolic process [IMP ![]() nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [IMP ![]() |
Molecular Function: |
molecular_function
[ND]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MKRKTAEVKG EKERNSKQIS LEEDKIKGMF NPKIWDKTFQ DGLKKEIEDS QPYNWGTIHE 60 61 LVNDDLLRAV RKEIETEIHF TKKETDIYRV NQSGDLANLS GLDWDDLSRL PNLFKLRQIL 120 121 YSKQYRDFFG YVTKAGKLSG SKTDMSINTY TKGCHLLTHD DVIGSRRISF ILYLPDPDRK 180 181 WKSHYGGGLR LFPSILPNVP HSDPSAKLVP QFNQIAFFKV LPGFSFHDVE EVKVDKHRLS 240 241 IQGWYHIPQV GEEGYIPGEE EAWVRNNTST LAQIESNVLE DFEFPKDERN ILSFHEVKHF 300 301 EKMLKGDAGA KTDNTPKESM TSVISDSVKL SEAEFTYLSQ YISPEHLSSK GIEKLQKQFV 360 361 ENSSLQIESF LNDDKSELLK KVIKQKELEQ ECPYHSKDVK APWKTAIPPH KARYLYIDGK 420 421 EYRNFQTEAD ILEALNNNDL PNFQFTKDAI KIISDASGNS RENNFDAELA LIDLAVFHKS 480 481 TIFKKYLALL TSLCPVSEQI LIRRFRPGMD FTLATKCRFN ELLKSNPDII DAVLEGTLCL 540 541 TPSAGWESGE LGGYELYMMD DDEDNKQYLK EDVEDASVYR ADDSGDSVLI NDPPAWNTFN 600 601 LVLRDESVLE FVKYVSWSAK SSRWDVKMKW DVKSCDEDGQ EDEA |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Krogan NJ, et al. (2006) |
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RLM1 TPA1 VAM6 YOR051C |
View Details | Ho Y, et al. (2002) |
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ARG4 AYR1 COR1 CPR6 ERG27 GPT2 LIA1 MAE1 OM45 PCT1 PDA1 PET10 PET9 PIL1 PRE10 PRO3 RET2 RNR2 RTN2 RVS161 SEC18 SEC21 SEC26 SEC27 SEC28 TIF34 TIF35 TPA1 YNL181W |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | 3829 - low filter | Green EM, et al (2005) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
BAIT | PREY | HITS | PUBLICATION | |
View Screen | 2 | Unpublished Fields Lab Data | ||
View Screen | 2 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..136] | ![]() |
N/A | No confident structure predictions are available. |
2 | View Details | [137..306] | ![]() |
10.455932 | 2OG-Fe(II) oxygenase superfamily No confident structure predictions are available. |
3 | View Details | [307..644] | ![]() |
N/A | No confident structure predictions are available. |
4 | View Details | [408..644] | ![]() |
N/A | No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)