| General Information: |
|
| Name(s) found: |
REB1 /
YBR049C
[SGD]
|
| Description(s) found:
Found 26 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 810 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[TAS ]
|
| Biological Process: |
termination of RNA polymerase I transcription
[TAS]
regulation of transcription from RNA polymerase II promoter [TAS ]
|
| Molecular Function: |
RNA polymerase II transcription factor activity
[IDA]
RNA polymerase I transcription termination factor activity [TAS ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MPSGHNDKNA NQESVEEAVL KYVGVGLDHQ NHDPQLHTKD LENKHSKKQN IVESSSDVDV 60
61 NNNDDSNRNE DNNDDSENIS ALNANESSSN VDHANSNEQH NAVMDWYLRQ TAHNQQDDED 120
121 DENNNNTDNG NDSNNHFSQS DIVVDDDDDK NKKDAGVGVD DDHQSMAMAA VAAAYTLSKN 180
181 NNNNNSIAND SNSRKRQHDN GNNHENSQKK RKNNNDDDDR QIGNVDPELT TLGDADDNDT 240
241 NNDVIDRDQL VHKAIIDADS ITQHPDFQQY LNTAADTDDN EKLKHIKDHL MRTHGLNHQN 300
301 KNHNDDTDDL SNSTKQYSEL QKDSMLDSSL NKSRNYMEVL PKVISQDTQP HQQKSPSHDN 360
361 EAGSVDNSEI SQLLQSAATK ASSLVSLSSS SATPSTSRSN NSKAFDKAED AALERFINEY 420
421 EAIERLTRQQ VCERIWSSDR PKDNFWNNIY KVLPYRSSSS IYKHMRRKYH IFEQRGKWTA 480
481 EEEQELAKLC AEKEGQWAEI GKTLGRMPED CRDRWRNYVK CGTNRASNRW SVEEEELLKK 540
541 VISDMLEEAQ QQQSQLHPNL LEEEQHLLQD DQNDHRNNDE DDDDTASAAA AAAAAIQEQQ 600
601 QLLQQKQQDD DDAIAAAAAA ASSSLGDNKD EDKPHDSLGI QLDDNSQNSM VPAPSATSTH 660
661 SKSLSNTIRR HNNKLRKSLM GNGKLDFKDI INWTIVSERM GGTRSRIQCR YKWNKLVKRE 720
721 AIAKIQTVKD DDMLWIFEKL RDLGITEDSQ VDWDELAALK PGMKLNGLEL KLCYERMKKK 780
781 VKGYKQKSIN EISKELVDYF SSNISMKTEN |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Krogan NJ, et al. (2006) |
|
ASF2 BUD23 ECM16 REB1 |
| View Details | Gavin AC, et al. (2006) |
|
ADE5,7 REB1 TOP1 VHR1 |
| View Details | Gavin AC, et al. (2002) |
|
ADE5,7 HHF1, HHF2 IOC3 ISW1 ISW2 ITC1 MOT1 NPL6 REB1 RFA1 RFX1 RNR2 RPC34 RPC40 RPO31 RSC2 RSC3 RSC58 RSC8 RVB2 SFH1 STH1 STO1 TAF1 TFC7 TOP1 VPS1 YBR090C-A, NHP6B |
| View Details | Ho Y, et al. (2002) |
|
DIS3 EAF3 FIP1 HAS1 HPR1 KAP95 MES1 MFT1 NAM8 NOP6 NUP1 NUP2 NUP60 PAP1 PCT1 REB1 RNT1 RRP4 RRP43 RRP6 RTT103 SIF2 SIN3 SNU56 SRP1 STO1 THO2 TRA1 UME1 YPR090W |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..248] |  |
7.26 | No description for 1ldvA was found. |
| 2 | View Details | [249..373] | |
N/A | No confident structure predictions are available. |
| 3 | View Details | [374..472] | |
89.9897 | c-Myb, DNA-binding domain |
| 4 | View Details | [473..522] | |
89.9897 | c-Myb, DNA-binding domain |
| 5 | View Details | [523..580] | |
89.9897 | c-Myb, DNA-binding domain |
| 6 | View Details | [581..657] | |
10.4 | c-Myb, DNA-binding domain |
| 7 | View Details | [658..720] | |
10.4 | c-Myb, DNA-binding domain |
| 8 | View Details | [721..810] | |
10.4 | c-Myb, DNA-binding domain |
Functions predicted (by domain):
| # | Gene Ontology predictions | |||||||||
| 1 | No functions predicted. | |||||||||
| 2 | No functions predicted. | |||||||||
| 3 |
|
|||||||||
| 4 | No functions predicted. | |||||||||
| 5 |
|
|||||||||
| 6 | No functions predicted. | |||||||||
| 7 | No functions predicted. | |||||||||
| 8 | No functions predicted. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)