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Protein Overview: YPR090W

General Information:
Name(s) found: YPR090W [SGD]
Description(s) found:
Found 6 descriptions.
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  • YPR090W SGDID:S0006294, Chr XVI from 713728-715938 [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 736 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNKAGLTAW DMVPPYSPLS EFLEQNNMFR YRTEVKHEIP QISQPKDTSL LMSNEDSTTK  60
   61 ETFDNIDLQV AGLTLSPGAN DNMFLDSDEK NMNHSQGAAT LIDPTYTEDY HGTFDYDKLS 120
  121 PDQYLEFSDF DIPQILNLLI SLPQKEPHMT TYPAGLIYQC IRYADHKIKS KPLVESLINL 180
  181 SLTKILTSVS SNGAAGLVST EASLQAGDIV LQSYWLSCLS FLYYYLCRDD SFFKRHPSVL 240
  241 QELINTIHSI IIELTSSIHC RLISLIDSTL LAYTTIQDVK QTLYKRDWNF FKKRKQAKLL 300
  301 LKEKNRKQLK EQQKKELHRK SQGQENHEEE EGQQDGNDSD DRASTNDDNN SSVSLFYDKE 360
  361 ILRHLYPPSF EEQMKPSPLK IVQIFGALSY VLNLHQTHPI FQQQCLSISV NWFATTLFNK 420
  421 ILKDKKKRSL SRAHAIQIRL NLSTLESWIQ NNDFCVPKPM LIDDFMWQRF PMTLIRDVGE 480
  481 IDLSDPILRN VATYKPIDEN NKDLIYDTSN SLFYYQPFHK IAQIHLEPVF QLLQWLQVAT 540
  541 TLDSEESLIS TMNLLPRITP VQLLKSMEKY NYELNENKFN SKLKKFLNNK IKDSKMSKAD 600
  601 AYLQEHEIPY LVLPTIPEMT DLYSKGPDSH SFQPFLPGSI QDDVYEIHDV NFKQRQNEPQ 660
  661 ISRTNSGTSD FTGDEDKAQY ETEGVGESID INETVEPESN AFNVGNDDYF KELNIPSSTA 720
  721 QRPAWSNNDD MEQNPW

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) DIS3 EAF3 FIP1 HAS1 HPR1 KAP95 MES1 MFT1 NAM8 NOP6 NUP1 NUP2 NUP60 PAP1 PCT1 REB1 RNT1 RRP4 RRP43 RRP6 RTT103 SIF2 SIN3 SNU56 SRP1 STO1 THO2 TRA1 UME1 YPR090W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] MSA 12.025966 View MSA. No confident structure predictions are available.
    2 View Details [335..736] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle