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Protein Overview: MRPL35

General Information:
Name(s) found: MRPL35 / YDR322W [SGD]
Description(s) found:
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  • gi|914994|gb|AAB64758.1| Ydr322wp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6320528|ref|NP_010608.1| Mitochondrial ribosomal protein of the large subunit; Mrpl35p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|46810394|sp|Q06678.1|RM35_YEAST RecName: Full=54S ribosomal protein L35, mitochondrial; AltName: Full=YmL35; Flags: Precursor [NCBI NR]
  • pir||S59788 ribosomal protein YmL35, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • 54S ribosomal protein L35, mitochondrial OS=Saccharomyces cerevisiae GN=MRPL35 PE=1 SV=1 [Swiss-Prot]
  • MRPL35 Mitochondrial ribosomal protein, large subunit [mips]
  • Mitochondrial ribosomal protein of the large subunit [SGD]
  • MRPL35, Chr IV from 1110581-1111684 [yeast_orfs2]
  • Chr IV from 1110581-1111684 [yeastorf3.fasta]
  • >Q06678 (Q06678) Chromosome IV COSMID 9798 [4932.FASTACCERV.txt]
  • MRPL35 SGDID:S0002730, Chr IV from 1110582-1111685, Verified ORF [yeastflysequest.fasta]
  • MRPL35 SGDID:S0002730, Chr IV from 1110584-1111687, Verified ORF [10112005cervSGD.fasta]
  • Mitochondrial ribosomal protein of the large subunit [Saccharomyces cerevisiae]gi|914994|gb|AAB64758.1| Ydr322wp [Saccharomyces cerevisiae]gi|2131429|pir||S59788 ribosomal protein YmL35, mitochondrial - yeast (Saccharomyces cerevisiae)gi|46810394|sp|Q [nrdb_11152004_Chlamydomonas]
  • (Q06678) 60S ribosomal protein L35, mitochondrial precursor (YmL35) [cerv4932.FASTAC]
  • MRPL35 SGDID:S000002730, Chr IV from 1110584-1111687, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • MRPL35 SGDID:S000002730, Chr IV from 1110586-1111689, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-contam.fasta]
  • MRPL35 SGDID:S000002730, Chr IV from 1110587-1111690, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • Ydr322wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Mitochondrial ribosomal protein of the large subunit; Mrpl35p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • 60S ribosomal protein L35, mitochondrial precursor (YmL35) [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • 54S ribosomal protein L35, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL35 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • MRPL35 SGDID:S000002730, Chr IV from 1110589-1111692, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-030211-contam.fasta]
  • MRPL35 SGDID:S000002730, Chr IV from 1110589-1111692, Genome Release 64-2-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [20141208_orf_trans.fasta]
  • YDR322W SGDID:S000002730, Chr IV from 1110589-1111692, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [IDALink to PubMed article][IPILink to PubMed article]
    Biological Process: translation [IDALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRSIHTTK ILQKPNATSH IWSDFTTRPS SLSIQSSKVK NYLFQKKASL DPPSISRRSN  60
   61 RIKYSPPEHI DEIFRMSYDF LEQRSSKFYE LANKTKNPLK KDALLIKAEI NNPEVQYNFQ 120
  121 FNNKLNNVKD IIDYDVPVYR HLGKQHWESY GQMLLMQRLE TLAAIPDTLP TLVPRAEVNI 180
  181 KFPFSTGVNK WIEPGEFLSS NVTSMRPIFK IQEYELVNVE KQLYTVLIVN PDVPDLSNDS 240
  241 FKTALCYGLV NINLTYNDNL IDPRKFHSSN IIADYLPPVP EKNAGKQRFV VWVFRQPLIE 300
  301 DKQGPNMLEI DRKELSRDDF DIRQFTKKYN LTAIGAHIWR SEWDAKVAAV REKYGLPPGR 360
  361 VFSRVRR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) IMG1 IMG2 MHR1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL15 MRPL16 MRPL17 MRPL20 MRPL23 MRPL24 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL6 MRPL7 MRPL8 YML6
    View Details (MIPS) Mewes HW, et al. (2004) IMG1 IMG2 MNP1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 RML2 RTC6 YDR115W YML6
    View Details Krogan NJ, et al. (2006) MRP7 MRPL17 MRPL28 MRPL32 MRPL35 MRPL7
    View Details Gavin AC, et al. (2006) IMG1 MHR1 MRP49 MRPL35 MRPL8 MRPL9 YML6
    View Details Gavin AC, et al. (2002) AAR2 ATG26 BEM2 BRR1 BUD3 BUD31 CDC33 CEF1 CLF1 COP1 CSN12 CUS1 CWC2 CWC22 CWC23 CYR1 DHH1 DIB1 ECM2 GCN2 HRR25 HSH155 HTA1 IMG1 IMG2 IML1 LEA1 LIN1 LSM1 LSM2 LSM4 LSM5 LSM6 LSM7 LUC7 MHR1 MRH4 MRM1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL38 MRPL39 MRPL4 MRPL44 MRPL51 MRPL6 MRPL7 MRPL8 MRPS5 MSL1 MUD1 NIC96 NSP1 NUG1 NUP116 NUP159 NUP82 PAT1 PRP11 PRP18 PRP19 PRP21 PRP24 PRP28 PRP3 PRP31 PRP38 PRP39 PRP4 PRP40 PRP42 PRP43 PRP46 PRP6 PRP8 PRP9 RET2 ROM2 RSE1 RTC6 RVB2 SEC1 SEC26 SEC27 SIN4 SLU7 SMB1 SMD1 SMD2 SMD3 SME1 SMX2 SMX3 SNF2 SNP1 SNT309 SNU114 SNU23 SNU56 SNU66 SNU71 SPP381 SPP382 SRB2 STO1 SWI3 SYF1 SYP1 TAF5 TOS4 UTP20 UTP21 YDR115W YML6
    View Details Qiu et al. (2008) IMG1 IMG2 MHR1 MNP1 MRP1 MRP10 MRP13 MRP17 MRP2 MRP20 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS8 MRPS9 NAM9 PET123 RML2 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 RTC6 SWS2 VAR1 YDR115W YML6 YMR31

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run UTP23 No Comments Hazbun TR, et al. (2003)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data MRPL35 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] deduced N/A No confident structure predictions are available.
    2 View Details [136..367] PSI-BLAST 108.228787 Phosphatidylethanolamine binding protein, PEBP


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle