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Protein Overview: ALA1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data ALA1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..570] Pfam 288.026872 tRNA synthetases class II (A) No confident structure predictions are available.
2 View Details [571..889] PSI-BLAST 65.69897 Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS)
3 View Details [890..958] MSA 4.182996 View MSA. Confident ab initio structure predictions are available.
4 View Details [876..958] MSA 8.240996 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 7.88410036819636 bayes_pls_golite062009
  • ligase activity
  • 6.92073480193262 bayes_pls_golite062009
  • alanine-tRNA ligase activity
  • 6.00693881794242 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
  • 2.99105702052936 bayes_pls_golite062009
  • serine-tRNA ligase activity
  • 2.46505535069103 bayes_pls_golite062009
  • glycine-tRNA ligase activity
  • 2.29229136935761 bayes_pls_golite062009
  • threonine-tRNA ligase activity
  • 2.18642354927 bayes_pls_golite062009
  • catalytic activity
  • 1.99372273395202 bayes_pls_golite062009
  • lysine-tRNA ligase activity
  • 1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
  • 1.72215103383322 bayes_pls_golite062009
  • transcription regulator activity
  • 1.47976803533584 bayes_pls_golite062009
  • nucleic acid binding
  • 1.30216701059664 bayes_pls_golite062009
  • DNA binding
  • 1.1862497958336 bayes_pls_golite062009
  • binding
  • 1.11470390774037 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
  • 0.921492123574877 bayes_pls_golite062009
  • transcription repressor activity
  • 0.80781620905336 bayes_pls_golite062009
  • transcription factor activity
  • 0.566858624145031 bayes_pls_golite062009
  • RNA binding
  • 0.0221706730298825 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
  • 0.00572514744734753 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle