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Protein Overview: RSC6

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MIH1 control 1 McCusker D, et al (2007)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..266] MSA 1.013955 View MSA. No confident structure predictions are available.
2 View Details [267..326] deduced N/A No confident structure predictions are available.
3 View Details [327..483] MSA 1.017969 View MSA. No confident structure predictions are available.
4 View Details [214..378] PSI-BLAST 29.69897 Solution structure of the SWIB domain of mouse BRG1-associated factor 60a
5 View Details [379..483] MSA 2.041995 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • transcription regulator activity
  • 4.01592136607858 bayes_pls_golite062009
  • basal transcription repressor activity
  • 3.09418413549897 bayes_pls_golite062009
  • binding
  • 2.67987108623459 bayes_pls_golite062009
  • transcription coactivator activity
  • 2.58234407051051 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 2.32480271621458 bayes_pls_golite062009
  • transcription repressor activity
  • 1.98538788872171 bayes_pls_golite062009
  • transcription activator activity
  • 1.83085389017135 bayes_pls_golite062009
  • transcription factor binding
  • 1.73032563380905 bayes_pls_golite062009
  • transcription cofactor activity
  • 1.60414428986898 bayes_pls_golite062009
  • protein binding
  • 1.58138506346812 bayes_pls_golite062009
  • structural molecule activity
  • 1.28917299936669 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.06026105710513 bayes_pls_golite062009
  • catalytic activity
  • 0.121624777548864 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle