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Protein Overview: RRP7

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RRP7 Huh WK, et al. (2003)
View Data RRP7 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..152] MSA 2.00994 View MSA. No confident structure predictions are available.
2 View Details [153..297] MSA 2.009975 View MSA. Confident ab initio structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 5.63242063989137 bayes_pls_golite062009
  • mRNA binding
  • 3.87784929382714 bayes_pls_golite062009
  • nucleic acid binding
  • 3.55052626921306 bayes_pls_golite062009
  • binding
  • 3.3324591601331 bayes_pls_golite062009
  • 3.14079080441249 bayes_pls_golite062009
  • single-stranded RNA binding
  • 1.9439583927206 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.58538594745054 bayes_pls_golite062009
  • structural molecule activity
  • 1.30816853575581 bayes_pls_golite062009
  • protein binding
  • 1.26544376923141 bayes_pls_golite062009
  • transcription regulator activity
  • 1.10029555513317 bayes_pls_golite062009
  • DNA binding
  • 0.984725930713243 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.762984801550668 bayes_pls_golite062009
  • snoRNA binding
  • 0.749770142991192 bayes_pls_golite062009
  • transcription factor activity
  • 0.255891228964936 bayes_pls_golite062009
  • ligase activity
  • 0.189138561929496 bayes_pls_golite062009
  • snRNA binding
  • 0.168885334268568 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle