| General Information: |
|
| Name(s) found: |
DEF1 /
YKL054C
[SGD]
|
| Description(s) found:
Found 29 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 738 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IMP ]
|
| Biological Process: |
telomere maintenance
[IMP]
response to DNA damage stimulus [IMP ]
ubiquitin-dependent protein catabolic process [IDA ][IMP]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSTQFRKSNH NSHSSKKLNP ALKSKIDTLT ELFPDWTSDD LIDIVQEYDD LETIIDKITS 60
61 GAVTRWDEVK KPAKKEKYEK KEQQHSYVPQ QHLPNPEDDI TYKSSNNSNS FTSTKHNSSN 120
121 NYTQARNKKK VQTPRAHTTG KHVNLDKGKH VPSKPVSNTT SWAAAVSVDT KHDVPQDSND 180
181 NNNEELEAQG QQAQEKNQEK EQEEQQQQEG HNNKEEHKQI EQPSLSSKKT TSRTSASQPK 240
241 KMSWAAIATP KPKAVKKTES PLENVAELKK EISDIKKDDQ KSEASEEKVN EQETSAQEQE 300
301 EETAEPSEEN EDRVPEVDGE EVQEEAEKKE QVKEEEQTAE ELEQEQDNVA APEEEVTVVE 360
361 EKVEISAVIS EPPEDQANTV PQPQQQSQQP QQPQQPQQPQ QPQQPQQQQQ PQQPQQPQQQ 420
421 LQQQQQQQQQ PVQAQAQAQE EQLSQNYYTQ QQQQQYAQQQ HQLQQQYLSQ QQQYAQQQQQ 480
481 HPQPQSQQPQ SQQSPQSQKQ GNNVAAQQYY MYQNQFPGYS YPGMFDSQGY AYGQQYQQLA 540
541 QNNAQTSGNA NQYNFQQGYG QAGANTAAAN LTSAAAAAAA SPATAHAQPQ QQQPYGGSFM 600
601 PYYAHFYQQS FPYGQPQYGV AGQYPYQLPK NNYNYYQTQN GQEQQSPNQG VAQHSEDSQQ 660
661 KQSQQQQQQQ PQGQPQPEVQ MQNGQPVNPQ QQMQFQQYYQ FQQQQQQAAA AAAAAAQQGV 720
721 PYGYNGYDYN SKNSRGFY |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Krogan NJ, et al. (2006) |
|
ATP11 ATP12 DEF1 |
| View Details | Ho Y, et al. (2002) |
|
ACC1 ADR1 ATP3 CCT3 CDC60 COP1 CPA2 DEF1 FAA1 FOL2 GAL7 GDE1 HEF3 IDH1 KGD1 LSC1 LST8 LYS12 MDH1 PHO86 POR1 PRO2 PTC6 PYC1 RAD1 RPN12 RRP3 SIP1 SLC1 STI1 TIF1, TIF2 TPS1 YBT1 YKU80 YML020W |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | No Comments | Reinke A, et al. (2004) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | phosphorylation data - cascade search | Green EM, et al (2005) | |
| View Run | identification data - first search in cascade | Green EM, et al (2005) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample bob1 (2nd set) from october 2005 | McCusker D, et al (2007) | |
| View Run | #33 Asynchronous SPB prep | Keck JM, et al. (2011) | |
| View Run | #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #35 Asynchronous SPB prep | Keck JM, et al. (2011) | |
| View Run | #31 Asynchronous Prep (Protease cleavage) | Keck JM, et al. (2011) | |
| View Run | #04 Alpha Factor Prep2 | Keck JM, et al. (2011) | |
| View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #14 Mitotic Prep2-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #02 Alpha Factor Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
| View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
| View Run | #06 Alpha Factor Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #08 Alpha Factor Prep4-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #19b Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) | |
| View Run | #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #19a Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..176] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [177..185] [412..484] |
|
13.67 | No description for 1l8mA was found. |
| 3 | View Details | [186..258] | |
13.67 | No description for 1l8mA was found. |
| 4 | View Details | [259..341] | |
13.67 | No description for 1l8mA was found. |
| 5 | View Details | [342..411] | |
13.67 | No description for 1l8mA was found. |
| 6 | View Details | [485..613] | |
10.9 | Fibrinogen |
| 7 | View Details | [614..738] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)