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Protein Overview: SGM1

General Information:
Name(s) found: SGM1 / YJR134C [SGD]
Description(s) found:
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  • gi|6322594|ref|NP_012668.1| Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus; Sgm1p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1352931|sp|P47166.1|SGM1_YEAST RecName: Full=Protein SGM1; AltName: Full=Slow growth on galactose and mannose protein 1 [NCBI NR]
  • pir||S57157 hypothetical protein YJR134c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1015870|emb|CAA89665.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YJR134C - Saccharomyces cerevisiae (Baker's yeast) [Swiss-Prot]
  • Protein SGM1 OS=Saccharomyces cerevisiae GN=SGM1 PE=1 SV=1 [Swiss-Prot]
  • SGM1 Protein required for wild-type growth rate on galactose and mannose [mips]
  • Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus [SGD]
  • SGM1, Chr X from 673422-675545, reverse complement [yeast_orfs2]
  • Chr X from 673422-675545, reverse complement [yeastorf3.fasta]
  • Chr X from 673423-675546, reverse complement [yeastorf4.fasta]
  • Chr X from 675547-673424, reverse complement [yeastorf5.fasta]
  • (P47166) Hypothetical 81.2 kDa protein in NMD5-HOM6 intergenic region [4932.FASTACCERV.txt]
  • SGM1 SGDID:S0003895, Chr X from 675767-673644, reverse complement, Verified ORF [yeastflysequest.fasta]
  • Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus [Saccharomyces cerevisiae]gi|1015870|emb|CAA89665.1| unnamed protein product [Saccharomyces cerevisiae]gi [nrdb_11152004_Chlamydomonas]
  • SGM1 SGDID:S000003895, Chr X from 675767-673644, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • SGM1 SGDID:S000003895, Chr X from 675846-673723, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [yeast-contam.fasta]
  • SGM1 SGDID:S000003895, Chr X from 675843-673720, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • SGM1 SGDID:S000003895, Chr X from 675842-673719, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [yeast-200209-contam.fasta]
  • Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus; Sgm1p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Hypothetical 81.2 kDa protein in NMD5-HOM6 intergenic region [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Protein SGM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGM1 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • SGM1 SGDID:S000003895, Chr X from 675852-673729, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [yeast-030211-contam.fasta]
  • SGM1 SGDID:S000003895, Chr X from 675852-673729, Genome Release 64-2-1, reverse complement, Verified ORF, "Protein of unknown function; required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [20141208_orf_trans.fasta]
  • YJR134C SGDID:S000003895, Chr X from 675852-673729, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 707 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDALink to PubMed article]
    COPI-coated vesicle [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKLSLEER LSLATKKGRK KNKRSTSNLS SPSPVVLSNN EQESARTSID DAAAGVVSID  60
   61 NAENIDDPAV RSESTVEGDT GKADSIAVDD VVHPDHNRTD CFDDTMVSLP TWLPKNYTEF 120
  121 TVEELVKEIS PEYLRLNKQI DDLTNELNRK SQIETTDSSF FKLIKEKDDL IDQLRKEGAK 180
  181 LAETELRQSN QIKALRTKVK DLEYEVSELN DSSAQSVENY NELQSLYHNI QGQLAEATNK 240
  241 LKDADKQKES LETLEKNIKE KDDLITILQQ SLDNMRTLLE KEKSEFQTEK KALQEATVDQ 300
  301 VTTLETKLEQ LRIELDSSTQ NLDAKSNRDF VDDQQSYEEK QHASFQYNRL KEQLESSKAN 360
  361 WDSIEYALNT KIVNLENRFE STMKEKNDIE EKYQTALRSS ETLGKQLEKE KENHSKAVLE 420
  421 VKDLERRAET LKSSLQSISD DYNLLKKKYE IQRSQLEQKE NELKPHQENS NEKIIDKIPV 480
  481 ELTDSLNSME GNIEDEWTLP QENSMLSLSM SKLGELESDP SLKPIYNESH ETICSEESQH 540
  541 FDRKNVDFSI DDIPEEAAAL QAIREGESMN SLNNTSIPYR RASVQLSNSN GHISAHLVNK 600
  601 LSTELKRLEG ELSASKELYD NLLKEKTKAN DEILRLLEEN DKFNEVNKQK DDLLKRVEQM 660
  661 QSKLETSLQL LGEKTEQVEE LENDVSDLKE MMHQQVQQMV EMQGKMR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ABP1 ACO1 AIM41 ATP4 BUD14 CAR2 CDC25 CKA2 COR1 CRZ1 CYS4 DCP1 DCP2 DNM1 EDC3 EDE1 EGD2 ENP1 FPR3 GAS1 GCN3 GLC7 GPH1 HHF1, HHF2 HRR25 HSP104 HXT7 HYP2 IPP1 LOC1 LSP1 LTV1 MDH1 MDS3 MGE1 NSA1 NUG1 OYE2 PEX19 PIL1 PIN4 PTC4 PUF3 RIO2 RPC19 RPM2 SAP185 SAP190 SAS10 SEC2 SEC23 SES1 SFB3 SGM1 SIT4 TGL1 TMA19 TSR1 VMA4 YBR225W YER138C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YPT6 SGM1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data SGM1 and ANP1 Huh WK, et al. (2003)
    View Data SGM1 Huh WK, et al. (2003)
    View Data SGM1 and COP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 78.39794 Heavy meromyosin subfragment
    2 View Details [245..310] deduced N/A No confident structure predictions are available.
    3 View Details [311..414] PSI-BLAST 9.39794 Tropomyosin
    4 View Details [415..707] MSA 8.111997 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle