| Protein: | SGM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 707 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGM1.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-96 | [2..707] | [856..1589] |
|
|
1.0E-94 | [2..707] | [645..1378] |
|
|
5.0E-94 | [2..707] | [70..803] |
|
|
6.0E-94 | [2..707] | [859..1592] |
|
|
8.0E-94 | [2..707] | [854..1587] |
|
|
2.0E-93 | [1..707] | [853..1588] |
|
Region A: Residues: [1-244] |
1 11 21 31 41 51
| | | | | |
1 MSKKLSLEER LSLATKKGRK KNKRSTSNLS SPSPVVLSNN EQESARTSID DAAAGVVSID 60
61 NAENIDDPAV RSESTVEGDT GKADSIAVDD VVHPDHNRTD CFDDTMVSLP TWLPKNYTEF 120
121 TVEELVKEIS PEYLRLNKQI DDLTNELNRK SQIETTDSSF FKLIKEKDDL IDQLRKEGAK 180
181 LAETELRQSN QIKALRTKVK DLEYEVSELN DSSAQSVENY NELQSLYHNI QGQLAEATNK 240
241 LKDA
|
| Detection Method: |  |
| Confidence: | 78.39794 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [245-310] |
1 11 21 31 41 51
| | | | | |
1 DKQKESLETL EKNIKEKDDL ITILQQSLDN MRTLLEKEKS EFQTEKKALQ EATVDQVTTL 60
61 ETKLEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [311-414] |
1 11 21 31 41 51
| | | | | |
1 LRIELDSSTQ NLDAKSNRDF VDDQQSYEEK QHASFQYNRL KEQLESSKAN WDSIEYALNT 60
61 KIVNLENRFE STMKEKNDIE EKYQTALRSS ETLGKQLEKE KENH
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-707] |
1 11 21 31 41 51
| | | | | |
1 SKAVLEVKDL ERRAETLKSS LQSISDDYNL LKKKYEIQRS QLEQKENELK PHQENSNEKI 60
61 IDKIPVELTD SLNSMEGNIE DEWTLPQENS MLSLSMSKLG ELESDPSLKP IYNESHETIC 120
121 SEESQHFDRK NVDFSIDDIP EEAAALQAIR EGESMNSLNN TSIPYRRASV QLSNSNGHIS 180
181 AHLVNKLSTE LKRLEGELSA SKELYDNLLK EKTKANDEIL RLLEENDKFN EVNKQKDDLL 240
241 KRVEQMQSKL ETSLQLLGEK TEQVEELEND VSDLKEMMHQ QVQQMVEMQG KMR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
