Protein Overview: SGF29

General Information:
Name(s) found:	SGF29 / YCL010C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|6686346\|sp\|P25554.2\|SGF29_YEAST RecName: Full=SAGA-associated factor 29; AltName: Full=29 kDa SAGA-associated factor; AltName: Full=SAGA histone acetyltransferase complex 29 kDa subunit [NCBI NR] gi\|6319836\|ref\|NP_009917.1\| SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex; Sgf29p [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S74287 hypothetical protein YCL010c - yeast (Saccharomyces cerevisiae) [NCBI NR] gi\|1907134\|emb\|CAA42349.1\| hypothetical protein [Saccharomyces cerevisiae] [NCBI NR] (P25554) Hypothetical 29.4 kDa protein in GBP2-ILV6 intergenic region [Swiss-Prot] SAGA-associated factor 29 OS=Saccharomyces cerevisiae GN=SGF29 PE=1 SV=2 [Swiss-Prot] SGF29 SAGA associated factor [mips] Probable subunit of SAGA histone acetyltransferase complex [SGD] YCL010C, Chr III from 103566-104345, reverse complement [yeast_orfs2] Chr III from 103566-104345, reverse complement [yeastorf3.fasta] Chr III from 104345-103566, reverse complement [yeastorf5.fasta] SGF29 SGDID:S0000516, Chr III from 104349-103570, reverse complement, Verified ORF [yeastflysequest.fasta] SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex [Saccharomyces cerevisiae]gi\|1907134\|emb\|CAA42349.1\| hypothetical protein [Saccharomyces cerevisiae]gi\|2146829\|pir\|\|S74287 hypothetical protein YCL010c - yea [nrdb_11152004_Chlamydomonas] SGF29 SGDID:S000000516, Chr III from 104349-103570, reverse complement, Verified ORF, "SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] SGF29 SGDID:S000000516, Chr III from 104350-103571, reverse complement, Verified ORF, "SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex" [yeast-contam.fasta] SGF29 SGDID:S000000516, Chr III from 104350-103571, reverse complement, Verified ORF, "Probable subunit of SAGA histone acetyltransferase complex" [yeast-200209-contam.fasta] SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex; Sgf29p [Saccharomyces cerevisiae] [nr-271106-contam.fasta] hypothetical protein [Saccharomyces cerevisiae] [nr-271106-contam.fasta] SAGA-associated factor 29 (29 kDa SAGA-associated factor) (SAGA histone acetyltransferase complex 29 kDa subunit) [nr-271106-contam.fasta] [chemostatdb.fasta] SAGA-associated factor 29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGF29 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] SGF29 SGDID:S000000516, Chr III from 104350-103571, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA recruitment to target promoters and H3 acetylation" [yeast-030211-contam.fasta] SGF29 SGDID:S000000516, Chr III from 104350-103571, Genome Release 64-2-1, reverse complement, Verified ORF, "Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA and TBP recruitment to target promoters and H3 acetylation" [20141208_orf_trans.fasta] YCL010C SGDID:S000000516, Chr III from 104350-103571, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes; HAT/Core module also contains Gcn5p, Ngg1p, and Ada2p; binds methylated histone H3K4; involved in transcriptional regulation through SAGA recruitment to target promoters and H3 acetylation" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
Organism:	Saccharomyces cerevisiae
Length:	259 amino acids
Gene Ontology:
Cellular Component:	SAGA complex [IDA]
Biological Process:	histone acetylation [IPI]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGYWDVVVS SLQDIYNANE VIPFDDELQT KKLNFLNMSK DQLQLHLNTF QEHMENVNRV  60
   61 HRILDNVRSN LSLMLNQSRE EKSEENTEDA EEGEGTRMAL SQGKKAVGKV GRSYWTSEYN 120
  121 PNAPILVGSE VAYKPRRGSA DGEWIQCEVL KVVADGTRFE VRDPEPDELG NSGKVYKCNR 180
  181 KELLLIPPGF PTKNYPPGTK VLARYPETTT FYPAIVIGTK RDGTCRLRFD GEEEVDKETE 240
  241 VTRRLVLPSP TALANLARK

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Riffle et al. (2010) (Unpublished Data)		ADA2 GCN5 HFI1 NGG1 SGF29 SGF73 SPT20 SPT3 SPT7 SPT8 TAF10 TAF12 TAF5 TAF6 TAF9 TRA1 UBP8
View Details	(MIPS) Mewes HW, et al. (2004)		ADA2 GCN5 HFI1 NGG1 SGF29 SGF73 SPT20 SPT3 SPT7 SPT8 TAF10 TAF12 TAF5 TAF6 TAF9 TRA1
View Details	Krogan NJ, et al. (2006)		ADA2 AHC1 AHC2 FMP40 GCN5 HFI1 MSS4 NGG1 PDR15 RAD59 REV3 SGF11 SGF29 SGF73 SNL1 SPT20 SPT3 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF3 TAF4 TAF5 TAF6 TAF7 TAF9 UBP8 YMR007W
View Details	Gavin AC, et al. (2006)		ADA2 HFI1 NGG1 SGF29 SGF73 SPT20 SPT3 SPT7 SPT8
View Details	Gavin AC, et al. (2002)		ADA2 ADH1 CLU1 FUN19 GCN5 HEM13 HFI1 KAP114 KAP123 MED4 MES1 MNN4 MOT1 MYO1 MYO4 NGG1 NOP1 PFK2 PSK1 PTC1 PUF6 RPB2 RPN9 RPO21 RPT5 RVB2 SGF29 SGF73 SIN3 SIN4 SPT15 SPT20 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF4 TAF5 TAF6 TAF7 TAF8 TAF9 TBF1 TEF4 UBP8 VAS1 VPS1
View Details	Ho Y, et al. (2002)		ADA2 FET4 GCN5 HFI1 SGF29 SPT7 TAF6 TRA1 UBP8
View Details	Qiu et al. (2008)		ADA2 ARP4 GAL11 GCN5 HFI1 MED6 NGG1 PGD1 RGR1 SGF29 SGF73 SPT20 SPT3 SPT7 SPT8 SRB5 SUS1 TAF10 TAF12 TAF13 TAF14 TAF3 TAF5 TAF6 TAF9 TRA1 UBP8

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	CEP3	sample cbf3 from feb 2005	Sandall S, et all (2006)
View Run	MLP2	#12 Mitotic Prep1-TiO2 Flowthrough	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	RPC19	SGF29	2	Unpublished Fields Lab Data
View Screen	VPS5	SGF29	2	Unpublished Fields Lab Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

	PROTEIN(S)	PUBLICATION
View Data	SGF29	Huh WK, et al. (2003)

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..135]	MSA	2.015947	View MSA. No confident structure predictions are available.
2	View Details	[136..259]	MSA	5.015973	View MSA. No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2