| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 11 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 5.362E-13 | 11 | 23 | 6 | 6292 |
| chromatin remodeling complex | 5.6493E-9 | 11 | 99 | 6 | 6292 |
| nucleoplasm part | 3.602E-8 | 11 | 245 | 7 | 6292 |
| nucleoplasm | 6.0476E-8 | 11 | 264 | 7 | 6292 |
| nuclear lumen | 2.453E-6 | 11 | 453 | 7 | 6292 |
| nucleus | 4.1084E-6 | 11 | 2041 | 11 | 6292 |
| Sin3-type complex | 2.771E-5 | 11 | 5 | 2 | 6292 |
| organelle lumen | 3.0633E-5 | 11 | 660 | 7 | 6292 |
| intracellular organelle lumen | 3.0633E-5 | 11 | 660 | 7 | 6292 |
| membrane-enclosed lumen | 4.5212E-5 | 11 | 700 | 7 | 6292 |
| nuclear part | 8.5482E-4 | 11 | 1103 | 7 | 6292 |
| protein complex | 1.0346E-3 | 11 | 1137 | 7 | 6292 |
| Rpd3L complex | 1.7483E-3 | 11 | 1 | 1 | 6292 |
| Rpd3L-Expanded complex | 1.7483E-3 | 11 | 1 | 1 | 6292 |
| membrane-bounded organelle | 3.5629E-3 | 11 | 3771 | 11 | 6292 |
| intracellular membrane-bounded organelle | 3.5629E-3 | 11 | 3771 | 11 | 6292 |
| nuclear chromatin | 6.8247E-3 | 11 | 73 | 2 | 6292 |
| Sin3 complex | 6.9763E-3 | 11 | 4 | 1 | 6292 |
| chromatin | 7.5696E-3 | 11 | 77 | 2 | 6292 |
| intracellular organelle | 8.2563E-3 | 11 | 4070 | 11 | 6292 |
| organelle | 8.2787E-3 | 11 | 4071 | 11 | 6292 |
| macromolecular complex | 9.4307E-3 | 11 | 1635 | 7 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein deacetylase activity | 8.4908E-27 | 11 | 32 | 11 | 6292 |
| histone deacetylase activity | 8.4908E-27 | 11 | 32 | 11 | 6292 |
| deacetylase activity | 2.7457E-26 | 11 | 35 | 11 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.4869E-24 | 11 | 48 | 11 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 6.8951E-22 | 11 | 80 | 11 | 6292 |
| hydrolase activity | 5.5655E-10 | 11 | 911 | 11 | 6292 |
| transcription factor binding | 6.0286E-7 | 11 | 43 | 4 | 6292 |
| transcription corepressor activity | 2.1992E-6 | 11 | 16 | 3 | 6292 |
| catalytic activity | 7.2915E-6 | 11 | 2150 | 11 | 6292 |
| transcription cofactor activity | 3.7921E-5 | 11 | 40 | 3 | 6292 |
| transcription repressor activity | 5.0638E-5 | 11 | 44 | 3 | 6292 |
| transcription coactivator activity | 5.731E-4 | 11 | 21 | 2 | 6292 |
| transcription regulator activity | 2.0191E-3 | 11 | 339 | 4 | 6292 |
| transcription activator activity | 4.8071E-3 | 11 | 61 | 2 | 6292 |