General Information: |
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Name(s) found: |
VMA6 /
YLR447C
[SGD]
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Description(s) found:
Found 31 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 345 amino acids |
Gene Ontology: |
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Cellular Component: |
vacuolar proton-transporting V-type ATPase, V0 domain
[TAS![]() ![]() vacuolar membrane [IDA ![]() |
Biological Process: |
vacuolar transport
[IDA![]() ![]() vacuolar acidification [TAS ![]() ![]() |
Molecular Function: |
proton-transporting ATPase activity, rotational mechanism
[IDA![]() ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MEGVYFNIDN GFIEGVVRGY RNGLLSNNQY INLTQCDTLE DLKLQLSSTD YGNFLSSVSS 60 61 ESLTTSLIQE YASSKLYHEF NYIRDQSSGS TRKFMDYITY GYMIDNVALM ITGTIHDRDK 120 121 GEILQRCHPL GWFDTLPTLS VATDLESLYE TVLVDTPLAP YFKNCFDTAE ELDDMNIEII 180 181 RNKLYKAYLE DFYNFVTEEI PEPAKECMQT LLGFEADRRS INIALNSLQS SDIDPDLKSD 240 241 LLPNIGKLYP LATFHLAQAQ DFEGVRAALA NVYEYRGFLE TGNLEDHFYQ LEMELCRDAF 300 301 TQQFAISTVW AWMKSKEQEV RNITWIAECI AQNQRERINN YISVY |
  | PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS |
View Details | Riffle et al. (2010) (Unpublished Data) |
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VMA6 VPH1 |
View Details | (MIPS) Mewes HW, et al. (2004) |
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CUP5 PPA1 STV1 TFP1 TFP3 VMA10 VMA13 VMA2 VMA4 VMA5 VMA6 VMA7 VMA8 VPH1 |
View Details | Krogan NJ, et al. (2006) |
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CEX1 VMA6 VPH1 |
View Details | Gavin AC, et al. (2006) |
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EMI2 VMA6 VPH2 |
View Details | Gavin AC, et al. (2002) |
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RAV1 TFP1 VMA10 VMA13 VMA2 VMA4 VMA5 VMA6 VMA7 VMA8 VPH1 |
View Details | Ho Y, et al. (2002) |
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ARP2 BUD9 BZZ1 CBK1 DAK2 GAL2 HXT7 LAS17 MOB2 OMS1 PEP1 PHO84 RPN1 RPN12 RVS167 SEC28 SIS1 SLA1 SQT1 TAO3 THI22 VMA6 YBL104C YHM2 |
View Details | Qiu et al. (2008) |
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CHS7 CUP5 LCB3 PPA1 RPS12 SOP4 STV1 TFP1 TFP3 TOS4 VMA10 VMA13 VMA2 VMA4 VMA5 VMA6 VMA7 VMA8 VMA9 VPH1 YPL199C ZRC1 |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | sample: hx3 | Hao Xu, et al. (2010) | |
View Run | sample: hx4 | Hao Xu, et al. (2010) | |
View Run | Sample: HX11 - both fusion and trans-SNARE complex formation take place. | Hao Xu, et al. (2010) | |
View Run | Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). | Hao Xu, et al. (2010) | |
View Run | Sample: HX14 - mixture in detergent (control). | Hao Xu, et al. (2010) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
  | PROTEIN(S) | PUBLICATION |
View Data |
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Huh WK, et al. (2003) |
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..345] | ![]() |
8.39 | Clathrin heavy chain proximal leg segment |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)