YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SOP4

General Information:
Name(s) found: SOP4 / YJL192C [SGD]
Description(s) found:
Found 26 descriptions.
SHOW ALL
  • ER-membrane protein; suppressor of pma1-7, deletion of SOP4 slows down the export of wild-type Pma1p and Pma1-7 from the ER [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    integral to membrane of membrane fraction [IDALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSQIVLLLS AFIYVASATA RRGTIKGRLD LAASNITGFV STRTSFKLYQ IGNFSTEYPY  60
   61 TSTTMFQDDE GNFEFANLPL NDGVNETTYY VMYPASMDFN LKPNRILIEF KNLENGTLQL 120
  121 NAFKNFFGRE YFPSKDITYP EKLQSMKVHP YITVELLHKA PIRSYLQARN VSIFSTGIVG 180
  181 NILNSRWKLA GVITLIALVV FPIIVEKLDP ETARAIREEA KRKQREKYAA VASK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) MSS1 NOP7 NTE1 PDS5 SOP4 STP3 YGR067C YTM1
    View Details Qiu et al. (2008) ASC1 ATG27 LCB3 MNL1 NAT3 RKI1 RPL13B RPL17B RPL18A, RPL18B RPL19B, RPL19A RPL20B RPL21B RPL23B, RPL23A RPL24A RPL24B RPL25 RPL26A RPL2A, RPL2B RPL33B RPL34A RPL35A, RPL35B RPL37A RPL39 RPL40B, RPL40A RPL41A, RPL41B RPL43B, RPL43A RPL6A RPL6B RPL9A RPP2A RPS0B RPS10A RPS15 RPS16B, RPS16A RPS17A RPS18B, RPS18A RPS19B RPS2 RPS21B RPS22A RPS23B, RPS23A RPS24A, RPS24B RPS25B RPS27B RPS6A, RPS6B RPS7B RPS8B, RPS8A SEC12 SOP4 VMA6 YDL133W YGR149W YOR292C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data SOP4 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle