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Protein Overview: SHP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen NUP1 SHP1 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SHP1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..121] deduced N/A No confident structure predictions are available.
2 View Details [122..340] MSA 1.067995 View MSA. No confident structure predictions are available.
3 View Details [341..423] PSI-BLAST 77.071898 p47
4 View Details [313..423] PSI-BLAST 34.221849 Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ubiquitin binding
  • 3.08647023955532 bayes_pls_golite062009
  • small conjugating protein binding
  • 2.81420954636829 bayes_pls_golite062009
  • binding
  • 2.2560795328149 bayes_pls_golite062009
  • protein binding
  • 1.0980671422772 bayes_pls_golite062009
  • nucleic acid binding
  • 0.603841502857006 bayes_pls_golite062009
  • hydrolase activity
  • 0.356947688028291 bayes_pls_golite062009
  • catalytic activity
  • 0.25774924710417 bayes_pls_golite062009
  • DNA binding
  • 0.227398235412559 bayes_pls_golite062009
  • transcription regulator activity
  • 0.194425568150525 bayes_pls_golite062009
  • peptidase activity
  • 0.0141774634963068 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
  • 2.63877637096497 bayes_pls_golite062009
  • protein binding
  • 1.89134588490127 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.83465130904364 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.16468510691469 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 0.919595189902044 bayes_pls_golite062009
  • nucleic acid binding
  • 0.383121378043805 bayes_pls_golite062009
  • hydrolase activity
  • 0.247201449341942 bayes_pls_golite062009
  • DNA binding
  • 0.0840213088061073 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0485636215870291 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.00343080662821671 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle