| General Information: |
|
| Name(s) found: |
RAD7 /
YJR052W
[SGD]
|
| Description(s) found:
Found 33 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 565 amino acids |
Gene Ontology: |
|
| Cellular Component: |
repairosome
[IDA ]
nucleotide-excision repair factor 4 complex [IDA ]
|
| Biological Process: |
nucleotide-excision repair, DNA damage recognition
[IDA][IMP]
|
| Molecular Function: |
DNA-dependent ATPase activity
[IDA]
damaged DNA binding [IDA ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MYRSRNRPKR GGENEVKGPN SALTQFLREE GISAENIKQK WYQRQSKKQE DATDEKKGKA 60
61 EDDSFTAEIS RVVEDEEIDE IGTGSGTETE RAQVSYDARM KLVPADSDEE EYETSHISDT 120
121 PVSLSSANDR ESLTKKRQNT AKIIQNRRRK RKRAADLLDR RVNKVSSLQS LCITKISENI 180
181 SKWQKEADES SKLVFNKLRD VLGGVSTANL NNLAKALSKN RALNDHTLQL FLKTDLKRLT 240
241 FSDCSKISFD GYKTLAIFSP HLTELSLQMC GQLNHESLLY IAEKLPNLKS LNLDGPFLIN 300
301 EDTWEKFFVI MKGRLEEFHI SNTHRFTDKS LSNLLINCGS TLVSLGLSRL DSISNYALLP 360
361 QYLVNDEFHS LCIEYPFNEE DVNDEIIINL LGQIGRTLRK LVLNGCIDLT DSMIINGLTA 420
421 FIPEKCPLEV LSLEESDQIT TDSLSYFFSK VELNNLIECS FRRCLQLGDM AIIELLLNGA 480
481 RDSLRSLNLN SLKELTKEAF VALACPNLTY LDLGFVRCVD DSVIQMLGEQ NPNLTVIDVF 540
541 GDNLVTEKAT MRPGLTLIGR QSDSI |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
ELC1 RAD7 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
RAD16 RAD7 |
| View Details | Krogan NJ, et al. (2006) |
|
ELC1 RAD7 |
| View Details | Ho Y, et al. (2002) |
|
ELC1 GND1 HHF1, HHF2 HTB2 HTZ1 RAD16 RAD7 SHP1 TMA29 TSA2 UBI4 |
| View Details | Qiu et al. (2008) |
|
ABF1 ELC1 RAD1 RAD14 RAD16 RAD2 RAD23 RAD4 RAD7 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | 3829 - low filter | Green EM, et al (2005) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..55] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [56..216] | |
17.69897 | Ribonuclease inhibitor |
| 3 | View Details | [217..271] | |
17.69897 | Ribonuclease inhibitor |
| 4 | View Details | [272..324] | |
17.69897 | Ribonuclease inhibitor |
| 5 | View Details | [325..450] | |
17.69897 | Ribonuclease inhibitor |
| 6 | View Details | [451..565] | |
17.69897 | Ribonuclease inhibitor |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)