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Protein Overview: RAB3C_RAT

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..227] PSI-BLAST 46.69897 Rab3a

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • GTPase activity
  • 4.52394549632777 bayes_pls_golite062009
  • microtubule motor activity
  • 4.51968578934603 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
  • 4.26230696590213 bayes_pls_golite062009
  • motor activity
  • 4.04927796049806 bayes_pls_golite062009
  • hydrolase activity
  • 3.63069754092699 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 3.4837867129694 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 3.35436118751376 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
  • 3.35170865169069 bayes_pls_golite062009
  • actin binding
  • 3.33639699088484 bayes_pls_golite062009
  • microfilament motor activity
  • 3.17800963620802 bayes_pls_golite062009
  • signal recognition particle binding
  • 3.10924684520019 bayes_pls_golite062009
  • transporter activity
  • 3.10463051760206 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 3.08390071341252 bayes_pls_golite062009
  • structural constituent of ribosome
  • 3.070470376968 bayes_pls_golite062009
  • transmembrane transporter activity
  • 2.95886887664984 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.95079405147356 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.87427509025394 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.85499564954033 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.85178667290149 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
  • 2.67957846350199 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
  • 2.67815672695824 bayes_pls_golite062009
  • tubulin binding
  • 2.67743463093593 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
  • 2.66230364606923 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • primary active transmembrane transporter activity
  • 2.61775212528604 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
  • 2.61467977505707 bayes_pls_golite062009
  • microtubule binding
  • 2.59155206524122 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
  • 2.57552435627908 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
  • 2.57107347424517 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
  • 2.57054427875021 bayes_pls_golite062009
  • nucleic acid binding
  • 2.51683451033161 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 2.50494515048649 bayes_pls_golite062009
  • ATPase activity, coupled
  • 2.43862163407966 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 2.4101693596493 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 2.40292717311506 bayes_pls_golite062009
  • ATPase activity
  • 2.39535714892224 bayes_pls_golite062009
  • amine transmembrane transporter activity
  • 2.29486577878686 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 2.26365379756656 bayes_pls_golite062009
  • actin filament binding
  • 2.24723363507804 bayes_pls_golite062009
  • DNA binding
  • 2.12258000781149 bayes_pls_golite062009
  • transcription regulator activity
  • 2.09345198747025 bayes_pls_golite062009
  • structural molecule activity
  • 2.08211451183607 bayes_pls_golite062009
  • ribonucleoprotein binding
  • 2.04103162399905 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.91091452720653 bayes_pls_golite062009
  • guanyl nucleotide binding
  • 1.89320355239381 bayes_pls_golite062009
  • guanyl ribonucleotide binding
  • 1.88721318481223 bayes_pls_golite062009
  • GTP binding
  • 1.87900088157196 bayes_pls_golite062009
  • 1.86855842486607 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 1.85943679361938 bayes_pls_golite062009
  • ribonucleotide binding
  • 1.85937484083653 bayes_pls_golite062009
  • purine nucleotide binding
  • 1.8521191028835 bayes_pls_golite062009
  • nucleotide binding
  • 1.84603132945448 bayes_pls_golite062009
  • kinase activity
  • 1.80889641165674 bayes_pls_golite062009
  • structural constituent of muscle
  • 1.75982319871463 bayes_pls_golite062009
  • protein transporter activity
  • 1.71214667007262 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • G-protein coupled receptor activity
  • 1.63949223587737 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.60386625568858 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
  • 1.59627719545436 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
  • 1.58971273330352 bayes_pls_golite062009
  • actin-dependent ATPase activity
  • 1.58897222423517 bayes_pls_golite062009
  • ATP binding
  • 1.5859264197035 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 1.55520429131224 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 1.53158018507951 bayes_pls_golite062009
  • GDP-dissociation inhibitor binding
  • 1.53046363842187 bayes_pls_golite062009
  • apolipoprotein receptor activity
  • 1.52496551152043 bayes_pls_golite062009
  • syntaxin-13 binding
  • 1.52496551152043 bayes_pls_golite062009
  • apolipoprotein A-I binding
  • 1.52496551152043 bayes_pls_golite062009
  • apolipoprotein A-I receptor activity
  • 1.52496551152043 bayes_pls_golite062009
  • antigen binding
  • 1.43656260286121 bayes_pls_golite062009
  • plus-end-directed microtubule motor activity
  • 1.38366133153678 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
  • 1.23799860254751 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
  • 1.23706764781183 bayes_pls_golite062009
  • GMP binding
  • 1.22634924609704 bayes_pls_golite062009
  • protein binding
  • 1.22129154759482 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.14475274823167 bayes_pls_golite062009
  • protein kinase activity
  • 1.12864835254143 bayes_pls_golite062009
  • ADP binding
  • 1.10601354993582 bayes_pls_golite062009
  • nucleotide kinase activity
  • 1.10251779925246 bayes_pls_golite062009
  • beta-catenin binding
  • 1.03146778136145 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • cation channel activity
  • 0.997064416395892 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 0.971476020912368 bayes_pls_golite062009
  • DNA polymerase activity
  • 0.928091843881235 bayes_pls_golite062009
  • GBD domain binding
  • 0.914270985726459 bayes_pls_golite062009
  • transcription activator activity
  • 0.889929694023098 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
  • 0.889480122725603 bayes_pls_golite062009
  • transcription factor activity
  • 0.887108427603557 bayes_pls_golite062009
  • protein methyltransferase activity
  • 0.876296121718575 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.782430219754236 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
  • 0.767424210804186 bayes_pls_golite062009
  • peptidase activity
  • 0.742461247007442 bayes_pls_golite062009
  • DNA helicase activity
  • 0.72881469450553 bayes_pls_golite062009
  • ribonuclease activity
  • 0.712344060953362 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
  • 0.69784475011795 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 0.688632087597536 bayes_pls_golite062009
  • signal transducer activity
  • 0.683309012097319 bayes_pls_golite062009
  • molecular transducer activity
  • 0.683309012097319 bayes_pls_golite062009
  • transmembrane receptor activity
  • 0.661834961742057 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 0.650964453464311 bayes_pls_golite062009
  • steroid hormone receptor binding
  • 0.647625526012423 bayes_pls_golite062009
  • calcium channel activity
  • 0.636216614902039 bayes_pls_golite062009
  • receptor activity
  • 0.633514002718998 bayes_pls_golite062009
  • histone methyltransferase activity
  • 0.63002958837536 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.6071273686445 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.5886142102548 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
  • 0.563503770238611 bayes_pls_golite062009
  • voltage-gated channel activity
  • 0.562664200036023 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 0.559798751382976 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.543891899378373 bayes_pls_golite062009
  • DNA clamp loader activity
  • 0.543512707823441 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 0.543089473677103 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.495691434532349 bayes_pls_golite062009
  • protein transmembrane transporter activity
  • 0.46552249844591 bayes_pls_golite062009
  • branched-chain aliphatic amino acid transmembrane transporter activity
  • 0.442220326523999 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
  • 0.439781986921438 bayes_pls_golite062009
  • anion transmembrane transporter activity
  • 0.43332053110728 bayes_pls_golite062009
  • signal sequence binding
  • 0.42240724331108 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
  • 0.40217318916177 bayes_pls_golite062009
  • drug transmembrane transporter activity
  • 0.38711726712063 bayes_pls_golite062009
  • hormone receptor binding
  • 0.351501100511918 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 0.345873656782869 bayes_pls_golite062009
  • potassium channel activity
  • 0.329290830676079 bayes_pls_golite062009
  • receptor binding
  • 0.309955875731734 bayes_pls_golite062009
  • gated channel activity
  • 0.299411774392227 bayes_pls_golite062009
  • translation regulator activity
  • 0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.274994961137851 bayes_pls_golite062009
  • myosin binding
  • 0.274885859454447 bayes_pls_golite062009
  • nuclear hormone receptor binding
  • 0.246160342138071 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.243902356228423 bayes_pls_golite062009
  • endopeptidase activity
  • 0.237098238833913 bayes_pls_golite062009
  • RNA helicase activity
  • 0.18426050934025 bayes_pls_golite062009
  • ion channel activity
  • 0.154779598791225 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
  • 0.147644650870465 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 0.14606996093053 bayes_pls_golite062009
  • amine-transporting ATPase activity
  • 0.135455889967401 bayes_pls_golite062009
  • channel activity
  • 0.134817721656507 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.134817721656507 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 0.13050483816765 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.126911677161968 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
  • 0.12351419478929 bayes_pls_golite062009
  • sterol transporter activity
  • 0.0950944830037703 bayes_pls_golite062009
  • voltage-gated calcium channel activity
  • 0.0789800146503108 bayes_pls_golite062009
  • RNA binding
  • 0.0693163519626152 bayes_pls_golite062009
  • cation-transporting ATPase activity
  • 0.0536898657672154 bayes_pls_golite062009
  • G-protein-coupled receptor binding
  • 0.0436504490626262 bayes_pls_golite062009
  • structural constituent of cytoskeleton
  • 0.0111338193708552 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven protein transmembrane transporter activity
  • 0.00571427458217011 bayes_pls_golite062009
  • macromolecule transmembrane transporter activity
  • 0.00571427458217011 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle