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Protein Overview: TAF7

General Information:
Name(s) found: TAF7 / YMR227C [SGD]
Description(s) found:
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  • gi|887608|emb|CAA90198.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6323883|ref|NP_013954.1| TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation; Taf7p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|2497195|sp|Q05021.1|TAF7_YEAST RecName: Full=Transcription initiation factor TFIID subunit 7; AltName: Full=TBP-associated factor 7; AltName: Full=TBP-associated factor 67 kDa; AltName: Full=TAFII-67 [NCBI NR]
  • pir||S57594 hypothetical protein YMR227c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • Transcription initiation factor TFIID subunit 7 OS=Saccharomyces cerevisiae GN=TAF7 PE=1 SV=1 [Swiss-Prot]
  • TAF7 TFIID subunit (TBP-associated factor), 67 kD [mips]
  • TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation [SGD]
  • TAF67, Chr XIII from 722612-724384, reverse complement [yeast_orfs2]
  • Chr XIII from 722612-724384, reverse complement [yeastorf3.fasta]
  • Chr XIII from 724384-722612, reverse complement [yeastorf5.fasta]
  • (Q05021) Hypothetical 67.6 kDa protein in MRPL44-MTF1 intergenic region [4932.FASTACCERV.txt]
  • TAF7 SGDID:S0004840, Chr XIII from 724384-722612, reverse complement, Verified ORF [yeastflysequest.fasta]
  • TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation [Saccharomyces cerevisiae]gi|887608|emb|CAA90198.1| unknown [Saccharomyces cerevisiae]gi|2497195|sp|Q05021|TAF7_YEAST Transcription initiation factor TFIID subunit 7 (TBP-ass [nrdb_11152004_Chlamydomonas]
  • (Q05021) Transcription initiation factor TFIID subunit 7 (TBP-associated factor 7) (TBP-associated factor 67 kDa) (TAFII-67) [cerv4932.FASTAC]
  • TAF7 SGDID:S000004840, Chr XIII from 724384-722612, reverse complement, Verified ORF, "TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation; Taf7p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Transcription initiation factor TFIID subunit 7 (TBP-associated factor 7) (TBP-associated factor 67 kDa) (TAFII-67) [nr-271106-contam.fasta]
  • unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Transcription initiation factor TFIID subunit 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF7 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • TAF7 SGDID:S000004840, Chr XIII from 724385-722613, Genome Release 64-1-1, reverse complement, Verified ORF, "TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation" [yeast-030211-contam.fasta]
  • TAF7 SGDID:S000004840, Chr XIII from 724385-722613, Genome Release 64-2-1, reverse complement, Verified ORF, "TFIID subunit (67 kDa); involved in RNA polymerase II transcription initiation" [20141208_orf_trans.fasta]
  • YMR227C SGDID:S000004840, Chr XIII from 724385-722613, Genome Release 64-1-1, reverse complement, Verified ORF, "TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 590 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    transcription factor TFIID complex [IDALink to PubMed article][TASLink to PubMed article]
    Biological Process: regulation of transcription involved in G1 phase of mitotic cell cycle [IPILink to PubMed articleLink to PubMed article]
    transcription initiation from RNA polymerase II promoter [TASLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: general RNA polymerase II transcription factor activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVIRIKKPR GPGEKDQPLE GEPKLKRIRI KTKVTDEDIK PKPKLKINLK KKKESADGKE  60
   61 KKNSLKLKLN LKKNEEPVKK IHKAPKLRLK PIRIPGEAYD SEASDIEDDP LIESGVILRI 120
  121 LPDIQLEFVK NSLESGDYSG ISIKWKNERH AVVTINDVMY GAILVDLPTV IEVNKSVDRK 180
  181 NLLKTFDVSQ MLLCIRPIQE EEEVYALEAP DTEDLVVKHF EGIEDEIWEN KETFLKGYNG 240
  241 APLSDMEAKH LKEIALKGYD YKHGISPPLY NVRNRRFRRK MDPNEIDYVE KVVDMLLKQD 300
  301 KQAEEVSYDL VDKSELQARQ ERVSSWENFK EEPGEPLSRP ALKKEEIHTI ASAVGKQGAE 360
  361 EEGEEGMEEE EEEDLDLGAA FESEEEGSGA EGDKEQQQEE VGDEVDQDTG GEDDDDDDDG 420
  421 DIEAAGGESE SDDEKDENRQ HTELLADELN ELETTLAHTK HKLSKATNPL LKSRFIDSIK 480
  481 KLEKEAELKR KQLQQTEDSV QKQHQHRSDA ETANNVEEEE EEEEEEEEED EVDEDEEDDE 540
  541 ENDEDEDNVH EREHIQENKV VRELDEAPAE ETLDQNDLDM MMLFGAEGDE

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) ADA2 HFI1 NGG1 SGF73 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF3 TAF4 TAF5 TAF6 TAF7 TAF9
    View Details (MIPS) Mewes HW, et al. (2004) TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF5 TAF6 TAF7 TAF9
    View Details Krogan NJ, et al. (2006) ADA2 AHC1 AHC2 FMP40 GCN5 HFI1 MSS4 NGG1 PDR15 RAD59 REV3 SGF11 SGF29 SGF73 SNL1 SPT20 SPT3 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF3 TAF4 TAF5 TAF6 TAF7 TAF9 UBP8 YMR007W
    View Details Gavin AC, et al. (2006) HEM13 PSK1 TAF7
    View Details Gavin AC, et al. (2002) ADA2 ADH1 CLU1 FUN19 GCN5 HEM13 HFI1 KAP114 KAP123 MED4 MES1 MNN4 MOT1 MYO1 MYO4 NGG1 NOP1 PFK2 PSK1 PTC1 PUF6 RPB2 RPN9 RPO21 RPT5 RVB2 SGF29 SGF73 SIN3 SIN4 SPT15 SPT20 SPT7 SPT8 TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF4 TAF5 TAF6 TAF7 TAF8 TAF9 TBF1 TEF4 UBP8 VAS1 VPS1
    View Details Qiu et al. (2008) SSL2 TAF1 TAF10 TAF11 TAF12 TAF13 TAF14 TAF2 TAF3 TAF4 TAF5 TAF6 TAF7 TAF8 TAF9 TFA1 TFB5

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen HSH49 TAF7 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data TAF7 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 27.69897 Heavy meromyosin subfragment
    2 View Details [153..436] PSI-BLAST 27.69897 Heavy meromyosin subfragment
    3 View Details [437..590] PSI-BLAST 2.69897 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle