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Protein Overview: PDX1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run VAM3 sample: hx3 Hao Xu, et al. (2010)
View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
View Run VAM3 Sample: HX13 - trans-SNARE complex forms but fusion is blocked. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data PDX1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..147] PSI-BLAST 163.522879 Ipoyl domain of dihydrolipoamide acetyltransferase
2 View Details [148..218] PSI-BLAST 4.045757 E3-binding domain of dihydrolipoamide succinyltransferase
3 View Details [219..410] PSI-BLAST 39.39794 Dihydrolipoamide succinyltransferase

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • dihydrolipoyllysine-residue acetyltransferase activity
  • 9.65061123545754 bayes_pls_golite062009
  • dihydrolipoamide S-acyltransferase activity
  • 9.64995677986911 bayes_pls_golite062009
  • S-acetyltransferase activity
  • 9.49696044977584 bayes_pls_golite062009
  • S-acyltransferase activity
  • 8.45313874919036 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
  • 8.17557182322815 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
  • 6.40483178382327 bayes_pls_golite062009
  • acetyltransferase activity
  • 6.08159176722072 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
  • 5.93985773477717 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
  • 5.74314131636952 bayes_pls_golite062009
  • acyltransferase activity
  • 5.72047003788767 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
  • 4.60481199262496 bayes_pls_golite062009
  • S-succinyltransferase activity
  • 4.10308166636667 bayes_pls_golite062009
  • dihydrolipoyllysine-residue succinyltransferase activity
  • 4.10308166636667 bayes_pls_golite062009
  • carnitine O-acyltransferase activity
  • 2.87366177129153 bayes_pls_golite062009
  • succinyltransferase activity
  • 2.08404693277798 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
  • 1.78431187655869 bayes_pls_golite062009
  • catalytic activity
  • 1.51562638409295 bayes_pls_golite062009
  • O-acyltransferase activity
  • 1.33852311685118 bayes_pls_golite062009
  • O-palmitoyltransferase activity
  • 1.22729402619659 bayes_pls_golite062009
  • carnitine O-palmitoyltransferase activity
  • 1.22729402619659 bayes_pls_golite062009
  • transferase activity
  • 1.08341671157927 bayes_pls_golite062009
  • carnitine O-acetyltransferase activity
  • 1.00868366840715 bayes_pls_golite062009
  • O-acetyltransferase activity
  • 0.1424856707148 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle