| Protein: | PDX1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 410 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDX1.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-87 | [18..400] | [97..454] |
|
|
9.0E-87 | [3..400] | [87..457] |
|
|
1.0E-75 | [4..400] | [157..530] |
|
|
1.0E-75 | [4..400] | [158..531] |
|
|
2.0E-75 | [4..400] | [158..531] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MLSAISKVST LKSCTRYLTK CNYHASAKLL AVKTFSMPAM SPTMEKGGIV SWKYKVGEPF 60
61 SAGDVILEVE TDKSQIDVEA LDDGKLAKIL KDEGSKDVDV GEPIAYIADV DDDLATIKLP 120
121 QEANTANAKS IEIKKPSADS TEATQQH
|
| Detection Method: |  |
| Confidence: | 163.522879 |
| Match: | 1fyc__ |
| Description: | Ipoyl domain of dihydrolipoamide acetyltransferase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [148-218] |
1 11 21 31 41 51
| | | | | |
1 LKKATVTPIK TVDGSQANLE QTLLPSVSLL LAENNISKQK ALKEIAPSGS NGRLLKGDVL 60
61 AYLGKIPQDS V
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1bal__ |
| Description: | E3-binding domain of dihydrolipoamide succinyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| dihydrolipoyllysine-residue acetyltransferase activity | 9.65061123545754 | bayes_pls_golite062009 |
| dihydrolipoamide S-acyltransferase activity | 9.64995677986911 | bayes_pls_golite062009 |
| S-acetyltransferase activity | 9.49696044977584 | bayes_pls_golite062009 |
| S-acyltransferase activity | 8.45313874919036 | bayes_pls_golite062009 |
| pyruvate dehydrogenase activity | 8.17557182322815 | bayes_pls_golite062009 |
| pyruvate dehydrogenase (acetyl-transferring) activity | 6.40483178382327 | bayes_pls_golite062009 |
| acetyltransferase activity | 6.08159176722072 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | 5.93985773477717 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 5.74314131636952 | bayes_pls_golite062009 |
| acyltransferase activity | 5.72047003788767 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 4.60481199262496 | bayes_pls_golite062009 |
| S-succinyltransferase activity | 4.10308166636667 | bayes_pls_golite062009 |
| dihydrolipoyllysine-residue succinyltransferase activity | 4.10308166636667 | bayes_pls_golite062009 |
| carnitine O-acyltransferase activity | 2.87366177129153 | bayes_pls_golite062009 |
| succinyltransferase activity | 2.08404693277798 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors | 1.78431187655869 | bayes_pls_golite062009 |
| catalytic activity | 1.51562638409295 | bayes_pls_golite062009 |
| O-acyltransferase activity | 1.33852311685118 | bayes_pls_golite062009 |
| O-palmitoyltransferase activity | 1.22729402619659 | bayes_pls_golite062009 |
| carnitine O-palmitoyltransferase activity | 1.22729402619659 | bayes_pls_golite062009 |
| transferase activity | 1.08341671157927 | bayes_pls_golite062009 |
| carnitine O-acetyltransferase activity | 1.00868366840715 | bayes_pls_golite062009 |
| O-acetyltransferase activity | 0.1424856707148 | bayes_pls_golite062009 |
|
Region A: Residues: [219-410] |
1 11 21 31 41 51
| | | | | |
1 NKVTEFIKKN ERLDLSNIKP IQLKPKIAEQ AQTKAADKPK ITPVEFEEQL VFHAPASIPF 60
61 DKLSESLNSF MKEAYQFSHG TPLMDTNSKY FDPIFEDLVT LSPREPRFKF SYDLMQIPKA 120
121 NNMQDTYGQE DIFDLLTGSD ATASSVRPVE KNLPEKNEYI LALNVSVNNK KFNDAEAKAK 180
181 RFLDYVRELE SF
|
| Detection Method: | |
| Confidence: | 39.39794 |
| Match: | 1c4tA_ |
| Description: | Dihydrolipoamide succinyltransferase |
Matching Structure (courtesy of the PDB): |
|
