| Protein: | YCF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1515 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..1511] | [12..1522] |
|
|
0.0 | [235..1509] | [12..1288] |
|
|
0.0 | [5..1511] | [12..1526] |
|
|
0.0 | [14..1510] | [9..1556] |
|
|
0.0 | [5..1511] | [12..1527] |
|
|
0.0 | [251..1509] | [10..1270] |
|
|
0.0 | [268..1506] | [16..1241] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MAGNLVSWAC KLCRSPEGFG PISFYGDFTQ CFIDGVILNL SAIFMITFGI RDLVNLCKKK 60
61 HSGIKYRRNW IIVSRMALVL LEIAFVSLAS LNISKEEAEN FTIVSQYAST MLSLFVALAL 120
121 HWIEYDRSVV ANTVLLFYWL FETFGNFAKL INILIRHTYE GIWYSGQTGF ILTLFQVITC 180
181 ASILLLEALP KKPLMPHQHI HQTLTRRKPN PYDSANIFSR ITFSWMSGLM KTGYEKYLVE 240
241 ADLYKLPRNF SSEELSQKLE KNWENEL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [268-609] |
1 11 21 31 41 51
| | | | | |
1 KQKSNPSLSW AICRTFGSKM LLAAFFKAIH DVLAFTQPQL LRILIKFVTD YNSERQDDHS 60
61 SLQGFENNHP QKLPIVRGFL IAFAMFLVGF TQTSVLHQYF LNVFNTGMYI KSALTALIYQ 120
121 KSLVLSNEAS GLSSTGDIVN LMSVDVQKLQ DLTQWLNLIW SGPFQIIICL YSLYKLLGNS 180
181 MWVGVIILVI MMPLNSFLMR IQKKLQKSQM KYKDERTRVI SEILNNIKSL KLYAWEKPYR 240
241 EKLEEVRNNK ELKNLTKLGC YMAVTSFQFN IVPFLVSCCT FAVFVYTEDR ALTTDLVFPA 300
301 LTLFNLLSFP LMIIPMVLNS FIEASVSIGR LFTFFTNEEL QP
|
| Detection Method: | |
| Confidence: | 56.79588 |
| Match: | PF00664 |
| Description: | ABC transporter transmembrane region |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [610-865] |
1 11 21 31 41 51
| | | | | |
1 DSVQRLPKVK NIGDVAINIG DDATFLWQRK PEYKVALKNI NFQAKKGNLT CIVGKVGSGK 60
61 TALLSCMLGD LFRVKGFATV HGSVAYVSQV PWIMNGTVKE NILFGHRYDA EFYEKTIKAC 120
121 ALTIDLAILM DGDKTLVGEK GISLSGGQKA RLSLARAVYA RADTYLLDDP LAAVDEHVAR 180
181 HLIEHVLGPN GLLHTKTKVL ATNKVSALSI ADSIALLDNG EITQQGTYDE ITKDADSPLW 240
241 KLLNNYGKKN NGKSNE
|
| Detection Method: | |
| Confidence: | 445.325697 |
| Match: | 1nbd__ |
| Description: | No description for 1nbd__ was found. |
| Term | Confidence | Notes |
| lipid transporter activity | 7.47642599298853 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 6.80339337010085 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 5.57844095962502 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.5689620139321 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.55992639965745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.50005167063544 | bayes_pls_golite062009 |
| cation channel activity | 5.46287131955314 | bayes_pls_golite062009 |
| homoaconitate hydratase activity | 5.33234586981482 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 5.29074477899638 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 5.1184221202951 | bayes_pls_golite062009 |
| potassium channel activity | 5.11125652739479 | bayes_pls_golite062009 |
| voltage-gated channel activity | 5.10064970232011 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.98276715440477 | bayes_pls_golite062009 |
| ion channel activity | 4.87468443062464 | bayes_pls_golite062009 |
| peptide antigen-transporting ATPase activity | 4.81855985294388 | bayes_pls_golite062009 |
| channel activity | 4.74517495695421 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.74517495695421 | bayes_pls_golite062009 |
| peptide transporter activity | 4.7442815698413 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 4.71935767060308 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.71152823189573 | bayes_pls_golite062009 |
| ATPase activity | 4.69795387297193 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 4.63590351019108 | bayes_pls_golite062009 |
| cadmium ion transmembrane transporter activity | 4.62439240790153 | bayes_pls_golite062009 |
| gated channel activity | 4.61941650351493 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.56509805974548 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 4.45975815173802 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.45923622153365 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.39781350157199 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.38133275795019 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.38085303582726 | bayes_pls_golite062009 |
| sulfonylurea receptor activity | 4.29224907929661 | bayes_pls_golite062009 |
| bilirubin transmembrane transporter activity | 4.16465937144981 | bayes_pls_golite062009 |
| hydrolase activity | 4.12107348093071 | bayes_pls_golite062009 |
| oligopeptide-transporting ATPase activity | 4.09365342567844 | bayes_pls_golite062009 |
| transporter activity | 3.71239480053329 | bayes_pls_golite062009 |
| structural molecule activity | 3.58406348799895 | bayes_pls_golite062009 |
| TAP binding | 3.43940121529172 | bayes_pls_golite062009 |
| TAP1 binding | 3.43940121529172 | bayes_pls_golite062009 |
| TAP2 binding | 3.43940121529172 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| phosphate transmembrane-transporting ATPase activity | 3.20894563245332 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 3.16975154423199 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.13960906549884 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.13913638619234 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.1318898376276 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.08390071341252 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 3.05511942104215 | bayes_pls_golite062009 |
| ATP binding | 3.01346604299372 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.00745742755195 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.96271391116269 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 2.9271291809464 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.91131545957759 | bayes_pls_golite062009 |
| tapasin binding | 2.81937502401698 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.77610331510393 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.77610331510393 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.70262534541085 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.70178191749524 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 2.69529191205818 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.67957846350199 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 2.67815672695824 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.6583477492092 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.63419811368692 | bayes_pls_golite062009 |
| nucleotide binding | 2.62374702628143 | bayes_pls_golite062009 |
| sterol transporter activity | 2.48473697371886 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.40292717311506 | bayes_pls_golite062009 |
| canalicular bile acid transmembrane transporter activity | 2.33958437214304 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.29486577878686 | bayes_pls_golite062009 |
| binding | 2.27048396817643 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| phosphate transmembrane transporter activity | 2.15147988861177 | bayes_pls_golite062009 |
| nucleic acid binding | 2.11222585187695 | bayes_pls_golite062009 |
| oligopeptide transporter activity | 2.05580564974083 | bayes_pls_golite062009 |
| voltage-gated calcium channel activity | 1.96314034513078 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 1.82177108193332 | bayes_pls_golite062009 |
| DNA binding | 1.7904783386531 | bayes_pls_golite062009 |
| organic anion transmembrane transporter activity | 1.76999970080179 | bayes_pls_golite062009 |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.68903321260301 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.59627719545436 | bayes_pls_golite062009 |
| phosphonate transmembrane transporter activity | 1.40269234722336 | bayes_pls_golite062009 |
| signal recognition particle binding | 1.39788601145414 | bayes_pls_golite062009 |
| monocarboxylic acid transmembrane transporter activity | 1.37836402136387 | bayes_pls_golite062009 |
| glutathione transmembrane transporter activity | 1.35514937365621 | bayes_pls_golite062009 |
| sphingolipid transporter activity | 1.35514937365621 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| peptide antigen binding | 1.31965692009502 | bayes_pls_golite062009 |
| molybdate ion transmembrane transporter activity | 1.28313088935613 | bayes_pls_golite062009 |
| molybdate transmembrane-transporting ATPase activity | 1.28313088935613 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptidase activity | 1.12876670227791 | bayes_pls_golite062009 |
| sulfate transmembrane-transporting ATPase activity | 1.1220946941463 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.10251779925246 | bayes_pls_golite062009 |
| dipeptide transporter activity | 1.01130176523309 | bayes_pls_golite062009 |
| signal transducer activity | 0.952448314982579 | bayes_pls_golite062009 |
| molecular transducer activity | 0.952448314982579 | bayes_pls_golite062009 |
| 0.869999622006359 | bayes_pls_golite062009 | |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| copper ion transmembrane transporter activity | 0.798934081014025 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.767424210804186 | bayes_pls_golite062009 |
| RNA helicase activity | 0.76547843267689 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.765442336337003 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| glutathione S-conjugate-exporting ATPase activity | 0.719430645205088 | bayes_pls_golite062009 |
| bile acid transmembrane transporter activity | 0.687612064139871 | bayes_pls_golite062009 |
| high voltage-gated calcium channel activity | 0.64930610472341 | bayes_pls_golite062009 |
| cholesterol transporter activity | 0.644421039250979 | bayes_pls_golite062009 |
| transcription factor activity | 0.603758349693077 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 0.46620222872538 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.46552249844591 | bayes_pls_golite062009 |
| long-chain fatty acid transporter activity | 0.445784480190949 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.442220326523999 | bayes_pls_golite062009 |
| signal sequence binding | 0.42240724331108 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 0.40217318916177 | bayes_pls_golite062009 |
| catalytic activity | 0.368034275052766 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| receptor activity | 0.277332279568238 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| fatty acid transporter activity | 0.251070374183928 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.243026482777117 | bayes_pls_golite062009 |
| neutral amino acid transmembrane transporter activity | 0.227570438294493 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 0.219473333671469 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 0.201503131198139 | bayes_pls_golite062009 |
| syntaxin-13 binding | 0.201503131198139 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 0.201503131198139 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 0.201503131198139 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.147644650870465 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
| sulfate transmembrane transporter activity | 0.104477131120205 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0869561319004262 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| RNA binding | 0.0693163519626152 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 0.0536898657672154 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0272673919333979 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.0132158893513235 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
|
Region A: Residues: [866-934] |
1 11 21 31 41 51
| | | | | |
1 FGDSSESSVR ESSIPVEGEL EQLQKLNDLD FGNSDAISLR RASDATLGSI DFGDDENIAK 60
61 REHREQGKV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.322 | a.4.1 | Homeodomain-like |
| View | Download | 0.324 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.226 | d.58.49 | YajQ-like |
| View | Download | 0.242 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.218 | a.4.1 | Homeodomain-like |
| Term | Confidence | Notes |
| lipid transporter activity | 6.95325922226092 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 5.4467861893359 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.44654566127945 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.44654566127945 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.43909190876515 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.4304944906989 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.38112407181712 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.87869064889244 | bayes_pls_golite062009 |
| ATPase activity | 4.60773943958528 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.38591214726007 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.32673473878039 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.31087891816858 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.31037981322306 | bayes_pls_golite062009 |
| hydrolase activity | 4.09315408758191 | bayes_pls_golite062009 |
| transporter activity | 3.47953169973151 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.96171085039592 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.94175800357966 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.90743799425416 | bayes_pls_golite062009 |
| ATP binding | 2.83986218503994 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.79195527951815 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.74359323245512 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.55506944753783 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.55426312645972 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.51344800975739 | bayes_pls_golite062009 |
| nucleotide binding | 2.48057252852174 | bayes_pls_golite062009 |
| binding | 2.24416672769019 | bayes_pls_golite062009 |
| catalytic activity | 0.372934161904337 | bayes_pls_golite062009 |
|
Region A: Residues: [935-1032] |
1 11 21 31 41 51
| | | | | |
1 KWNIYLEYAK ACNPKSVCVF ILFIVISMFL SVMGNVWLKH WSEVNSRYGS NPNAARYLAI 60
61 YFALGIGSAL ATLIQTIVLW VFCTIHASKY LHNLMTNS
|
|
Region B: Residues: [1051-1248] |
1 11 21 31 41 51
| | | | | |
1 NRFSNDIYKV DALLGRTFSQ FFVNAVKVTF TITVICATTW QFIFIIIPLS VFYIYYQQYY 60
61 LRTSRELRRL DSITRSPIYS HFQETLGGLA TVRGYSQQKR FSHINQCRID NNMSAFYPSI 120
121 NANRWLAYRL ELIGSIIILG AATLSVFRLK QGTLTAGMVG LSLSYALQIT QTLNWIVRMT 180
181 VEVETNIVSV ERIKEYAD
|
| Detection Method: | |
| Confidence: | 525.218487 |
| Match: | 1jsqA_ |
| Description: | MsbA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| metal ion transmembrane transporter activity | 6.80339337010085 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 6.58863529263644 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 6.58067278719409 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 6.57974651657836 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 6.57922174989907 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 6.57807080367604 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 6.48406410175216 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 6.48154954364331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 6.40467109535527 | bayes_pls_golite062009 |
| ATPase activity, coupled | 6.40151534181487 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 6.38373914253885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 6.38247436082206 | bayes_pls_golite062009 |
| ATPase activity | 6.30019941712404 | bayes_pls_golite062009 |
| hydrolase activity | 5.58566368416351 | bayes_pls_golite062009 |
| cation channel activity | 5.46287131955314 | bayes_pls_golite062009 |
| homoaconitate hydratase activity | 5.33234586981482 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 5.29074477899638 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 5.1184221202951 | bayes_pls_golite062009 |
| potassium channel activity | 5.11125652739479 | bayes_pls_golite062009 |
| voltage-gated channel activity | 5.10064970232011 | bayes_pls_golite062009 |
| ion channel activity | 4.87468443062464 | bayes_pls_golite062009 |
| peptide antigen-transporting ATPase activity | 4.81855985294388 | bayes_pls_golite062009 |
| channel activity | 4.74517495695421 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.74517495695421 | bayes_pls_golite062009 |
| peptide transporter activity | 4.7442815698413 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 4.71935767060308 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.71152823189573 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 4.63590351019108 | bayes_pls_golite062009 |
| cadmium ion transmembrane transporter activity | 4.62439240790153 | bayes_pls_golite062009 |
| gated channel activity | 4.61941650351493 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.56509805974548 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 4.45975815173802 | bayes_pls_golite062009 |
| sulfonylurea receptor activity | 4.29224907929661 | bayes_pls_golite062009 |
| bilirubin transmembrane transporter activity | 4.16465937144981 | bayes_pls_golite062009 |
| oligopeptide-transporting ATPase activity | 4.09365342567844 | bayes_pls_golite062009 |
| structural molecule activity | 3.58406348799895 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.4837867129694 | bayes_pls_golite062009 |
| TAP binding | 3.43940121529172 | bayes_pls_golite062009 |
| TAP1 binding | 3.43940121529172 | bayes_pls_golite062009 |
| TAP2 binding | 3.43940121529172 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 3.40690615950081 | bayes_pls_golite062009 |
| ribonucleotide binding | 3.40594996232845 | bayes_pls_golite062009 |
| purine nucleotide binding | 3.3669118613715 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| nucleotide binding | 3.33248266870364 | bayes_pls_golite062009 |
| phosphate transmembrane-transporting ATPase activity | 3.20894563245332 | bayes_pls_golite062009 |
| ATP binding | 3.17398570826788 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 3.16975154423199 | bayes_pls_golite062009 |
| lipid transporter activity | 3.14635082108971 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.13913638619234 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 3.12628113185041 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.08390071341252 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 3.0710107594224 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 3.05511942104215 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 2.9271291809464 | bayes_pls_golite062009 |
| tapasin binding | 2.81937502401698 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.77610331510393 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.77610331510393 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 2.69529191205818 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.67957846350199 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 2.67815672695824 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.63419811368692 | bayes_pls_golite062009 |
| sterol transporter activity | 2.48473697371886 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.40292717311506 | bayes_pls_golite062009 |
| canalicular bile acid transmembrane transporter activity | 2.33958437214304 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.29486577878686 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| phosphate transmembrane transporter activity | 2.15147988861177 | bayes_pls_golite062009 |
| nucleic acid binding | 2.11222585187695 | bayes_pls_golite062009 |
| oligopeptide transporter activity | 2.05580564974083 | bayes_pls_golite062009 |
| voltage-gated calcium channel activity | 1.96314034513078 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 1.82177108193332 | bayes_pls_golite062009 |
| DNA binding | 1.7904783386531 | bayes_pls_golite062009 |
| organic anion transmembrane transporter activity | 1.76999970080179 | bayes_pls_golite062009 |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.68903321260301 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.59627719545436 | bayes_pls_golite062009 |
| phosphonate transmembrane transporter activity | 1.40269234722336 | bayes_pls_golite062009 |
| signal recognition particle binding | 1.39788601145414 | bayes_pls_golite062009 |
| monocarboxylic acid transmembrane transporter activity | 1.37836402136387 | bayes_pls_golite062009 |
| glutathione transmembrane transporter activity | 1.35514937365621 | bayes_pls_golite062009 |
| sphingolipid transporter activity | 1.35514937365621 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| peptide antigen binding | 1.31965692009502 | bayes_pls_golite062009 |
| molybdate ion transmembrane transporter activity | 1.28313088935613 | bayes_pls_golite062009 |
| molybdate transmembrane-transporting ATPase activity | 1.28313088935613 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptidase activity | 1.12876670227791 | bayes_pls_golite062009 |
| sulfate transmembrane-transporting ATPase activity | 1.1220946941463 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.10251779925246 | bayes_pls_golite062009 |
| dipeptide transporter activity | 1.01130176523309 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| signal transducer activity | 0.952448314982579 | bayes_pls_golite062009 |
| molecular transducer activity | 0.952448314982579 | bayes_pls_golite062009 |
| 0.869999622006359 | bayes_pls_golite062009 | |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| copper ion transmembrane transporter activity | 0.798934081014025 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.767424210804186 | bayes_pls_golite062009 |
| RNA helicase activity | 0.76547843267689 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.765442336337003 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| glutathione S-conjugate-exporting ATPase activity | 0.719430645205088 | bayes_pls_golite062009 |
| bile acid transmembrane transporter activity | 0.687612064139871 | bayes_pls_golite062009 |
| high voltage-gated calcium channel activity | 0.64930610472341 | bayes_pls_golite062009 |
| cholesterol transporter activity | 0.644421039250979 | bayes_pls_golite062009 |
| transcription factor activity | 0.603758349693077 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 0.46620222872538 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.46552249844591 | bayes_pls_golite062009 |
| long-chain fatty acid transporter activity | 0.445784480190949 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.442220326523999 | bayes_pls_golite062009 |
| signal sequence binding | 0.42240724331108 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 0.40217318916177 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| receptor activity | 0.277332279568238 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| fatty acid transporter activity | 0.251070374183928 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.243026482777117 | bayes_pls_golite062009 |
| neutral amino acid transmembrane transporter activity | 0.227570438294493 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 0.219473333671469 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 0.201503131198139 | bayes_pls_golite062009 |
| syntaxin-13 binding | 0.201503131198139 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 0.201503131198139 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 0.201503131198139 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.147644650870465 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.12351419478929 | bayes_pls_golite062009 |
| sulfate transmembrane transporter activity | 0.104477131120205 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0869561319004262 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| RNA binding | 0.0693163519626152 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 0.0536898657672154 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0272673919333979 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.0132158893513235 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 0.00571427458217011 | bayes_pls_golite062009 |
|
Region A: Residues: [1033-1050] |
1 11 21 31 41 51
| | | | | |
1 VLRAPMTFFE TTPIGRIL
|
|
Region B: Residues: [1249-1515] |
1 11 21 31 41 51
| | | | | |
1 LKSEAPLIVE GHRPPKEWPS QGDIKFNNYS TRYRPELDLV LKHINIHIKP NEKVGIVGRT 60
61 GAGKSSLTLA LFRMIEASEG NIVIDNIAIN EIGLYDLRHK LSIIPQDSQV FEGTVRENID 120
121 PINQYTDEAI WRALELSHLK EHVLSMSNDG LDAQLTEGGG NLSVGQRQLL CLARAMLVPS 180
181 KILVLDEATA AVDVETDKVV QETIRTAFKD RTILTIAHRL NTIMDSDRII VLDNGKVAEF 240
241 DSPGQLLSDN KSLFYSLCME AGLVNEN
|
| Detection Method: | |
| Confidence: | 525.218487 |
| Match: | 1jsqA_ |
| Description: | MsbA |
| Matching Structure (courtesy of the PDB): |
|
