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View Protein Complex Details

Complex Overview

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
ARP9
  • nucleus
  • SWI/SNF complex
  • RSC complex
  • ATP-dependent chromatin remodeling
  • DNA-dependent ATPase activity
  • general RNA polymerase II transcription factor activity
  • BEM2
  • mitochondrion
  • intracellular
  • small GTPase mediated signal transduction
  • cellular cell wall organization
  • microtubule cytoskeleton organization
  • budding cell bud growth
  • actin cytoskeleton organization
  • Rho GTPase activator activity
  • signal transducer activity
  • DIM1
  • nuclear outer membrane
  • nucleolus
  • rRNA modification
  • ribosome biogenesis
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
  • ENP1
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • preribosome, small subunit precursor
  • ribosome biogenesis
  • rRNA processing
  • snoRNA binding
  • HRR25
  • nucleus
  • plasma membrane
  • DNA repair
  • nuclear division
  • ribosomal small subunit biogenesis
  • chromosome segregation
  • mitosis
  • meiosis
  • casein kinase activity
  • LTV1
  • nucleus
  • late endosome membrane
  • cytoplasm
  • preribosome, small subunit precursor
  • ribosomal small subunit export from nucleus
  • response to oxidative stress
  • ribosomal small subunit biogenesis
  • response to osmotic stress
  • ribosome biogenesis
  • molecular_function
  • NOB1
  • nucleus
  • preribosome
  • maturation of SSU-rRNA
  • ribosomal small subunit biogenesis
  • ribosome biogenesis
  • proteasome assembly
  • RNA binding
  • protein binding
  • PNO1
  • nucleus
  • nuclear outer membrane
  • nucleolus
  • protein complex assembly
  • ribosome biogenesis
  • rRNA processing
  • unfolded protein binding
  • RIO2
  • nucleus
  • cytoplasm
  • cytosol
  • maturation of SSU-rRNA
  • protein kinase activity
  • nucleocytoplasmic transporter activity
  • RRP12
  • nucleus
  • ribosome
  • maturation of SSU-rRNA
  • ribosome biogenesis
  • molecular_function
  • SNF12
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • general RNA polymerase II transcription factor activity
  • SNF2
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • double-strand break repair
  • DNA-dependent ATPase activity
  • general RNA polymerase II transcription factor activity
  • SNF5
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • double-strand break repair
  • general RNA polymerase II transcription factor activity
  • SNF6
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • general RNA polymerase II transcription factor activity
  • SWI1
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • regulation of transcription from RNA polymerase II promoter
  • general RNA polymerase II transcription factor activity
  • SWI3
  • SWI/SNF complex
  • chromatin remodeling complex
  • chromatin remodeling
  • general RNA polymerase II transcription factor activity
  • SWP82
  • nucleus
  • SWI/SNF complex
  • chromatin remodeling
  • ER-associated protein catabolic process
  • regulation of transcription
  • transcription activator activity
  • TSR1
  • cytoplasm
  • nucleolus
  • ribosome biogenesis
  • rRNA processing
  • ribonucleoprotein binding
  • VPS1
  • membrane fraction
  • peroxisome
  • cytoplasm
  • mitochondrial outer membrane
  • protein retention in Golgi apparatus
  • peroxisome organization
  • vacuolar transport
  • protein targeting to vacuole
  • actin cytoskeleton organization
  • GTPase activity
  • YGR054W
  • ribosome
  • translational initiation
  • translation initiation factor activity
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    SWI/SNF-type complex 2.6503E-18 20 13 8 6292
    SWI/SNF complex 2.6503E-18 20 13 8 6292
    chromatin remodeling complex 3.0437E-10 20 99 8 6292
    nucleus 1.7888E-6 20 2041 17 6292
    nuclear part 2.5082E-5 20 1103 12 6292
    preribosome, small subunit precursor 1.4291E-4 20 6 2 6292
    preribosome 1.5437E-4 20 34 3 6292
    intracellular organelle 1.6178E-4 20 4070 20 6292
    organelle 1.6258E-4 20 4071 20 6292
    macromolecular complex 2.7306E-4 20 1635 13 6292
    membrane-bounded organelle 5.0591E-4 20 3771 19 6292
    intracellular membrane-bounded organelle 5.0591E-4 20 3771 19 6292
    outer membrane 2.1034E-3 20 178 4 6292
    organelle outer membrane 2.1034E-3 20 178 4 6292
    intracellular organelle part 2.2217E-3 20 2282 14 6292
    organelle part 2.2217E-3 20 2282 14 6292
    nuclear outer membrane 2.3759E-3 20 86 3 6292
    nuclear membrane 3.3474E-3 20 97 3 6292
    nucleolus 3.9018E-3 20 211 4 6292
    intracellular part 7.7919E-3 20 4938 20 6292
    intracellular 9.0491E-3 20 4975 20 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    chromatin remodeling 1.3859E-11 20 68 8 6292
    chromatin modification 2.0974E-8 20 168 8 6292
    rRNA processing 7.6117E-8 20 128 7 6292
    chromatin organization 9.2387E-8 20 203 8 6292
    rRNA metabolic process 1.2182E-7 20 137 7 6292
    ribosome biogenesis 4.0627E-7 20 346 9 6292
    ribonucleoprotein complex biogenesis 7.8766E-7 20 374 9 6292
    ncRNA processing 2.6182E-6 20 215 7 6292
    ncRNA metabolic process 8.5827E-6 20 257 7 6292
    ribosomal small subunit biogenesis 6.8171E-5 20 26 3 6292
    RNA processing 1.0815E-4 20 380 7 6292
    cellular component biogenesis 1.2516E-4 20 694 9 6292
    chromosome organization 1.6859E-4 20 555 8 6292
    cellular component organization 1.9067E-4 20 1582 13 6292
    organelle organization 2.0013E-4 20 1127 11 6292
    nucleic acid metabolic process 3.2394E-4 20 1415 12 6292
    maturation of SSU-rRNA 7.9718E-4 20 59 3 6292
    cellular process 8.6878E-4 20 4426 20 6292
    nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 8.7876E-4 20 1566 12 6292
    cellular nitrogen compound metabolic process 2.8126E-3 20 1770 12 6292
    gene expression 2.9713E-3 20 1283 10 6292
    nitrogen compound metabolic process 3.1375E-3 20 1791 12 6292
    RNA metabolic process 6.2445E-3 20 954 8 6292
    cellular macromolecule metabolic process 8.4899E-3 20 2285 13 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    general RNA polymerase II transcription factor activity 5.6238E-10 20 64 7 6292
    RNA polymerase II transcription factor activity 8.4753E-8 20 130 7 6292
    transcription regulator activity 4.6573E-6 20 339 8 6292
    rRNA (adenine-N6,N6-)-dimethyltransferase activity 3.1786E-3 20 1 1 6292
    nucleocytoplasmic transporter activity 3.1786E-3 20 1 1 6292
    casein kinase activity 3.1786E-3 20 1 1 6292
    rRNA (adenine) methyltransferase activity 3.1786E-3 20 1 1 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle