| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| holo TFIIH complex | 1.2429E-20 | 8 | 10 | 7 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 2.3868E-14 | 8 | 56 | 7 | 6292 |
| transcription factor complex | 1.3658E-13 | 8 | 71 | 7 | 6292 |
| nucleotide-excision repair factor 3 complex | 3.7495E-11 | 8 | 7 | 4 | 6292 |
| nucleoplasm part | 9.6603E-10 | 8 | 245 | 7 | 6292 |
| nucleoplasm | 1.6353E-9 | 8 | 264 | 7 | 6292 |
| nucleotide-excision repair complex | 6.3661E-9 | 8 | 21 | 4 | 6292 |
| nuclear lumen | 7.205E-8 | 8 | 453 | 7 | 6292 |
| organelle lumen | 9.8757E-7 | 8 | 660 | 7 | 6292 |
| intracellular organelle lumen | 9.8757E-7 | 8 | 660 | 7 | 6292 |
| membrane-enclosed lumen | 1.4845E-6 | 8 | 700 | 7 | 6292 |
| nuclear part | 3.3951E-5 | 8 | 1103 | 7 | 6292 |
| protein complex | 4.178E-5 | 8 | 1137 | 7 | 6292 |
| nucleus | 1.2145E-4 | 8 | 2041 | 8 | 6292 |
| organelle part | 2.9704E-4 | 8 | 2282 | 8 | 6292 |
| intracellular organelle part | 2.9704E-4 | 8 | 2282 | 8 | 6292 |
| macromolecular complex | 4.9027E-4 | 8 | 1635 | 7 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| general RNA polymerase II transcription factor activity | 6.386E-14 | 8 | 64 | 7 | 6292 |
| RNA polymerase II transcription factor activity | 1.0759E-11 | 8 | 130 | 7 | 6292 |
| transcription regulator activity | 9.4796E-9 | 8 | 339 | 7 | 6292 |
| RNA polymerase II carboxy-terminal domain kinase activity | 1.2715E-3 | 8 | 1 | 1 | 6292 |
| protein kinase regulator activity | 1.4238E-3 | 8 | 46 | 2 | 6292 |
| kinase regulator activity | 1.6147E-3 | 8 | 49 | 2 | 6292 |
| cyclin-dependent protein kinase activating kinase activity | 2.5415E-3 | 8 | 2 | 1 | 6292 |
| cysteine-type endopeptidase activity | 5.0773E-3 | 8 | 4 | 1 | 6292 |