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Protein Overview: HRT1

Protein Complex Data

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..121] PSI-BLAST 309.30103 RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 10.2497392096259 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 10.0460587929138 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 8.99384576623969 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 7.6988425139962 bayes_pls_golite062009
  • ligase activity
  • 3.92677358871643 bayes_pls_golite062009
  • binding
  • 2.78710909602478 bayes_pls_golite062009
  • NEDD8 ligase activity
  • 2.41658628840288 bayes_pls_golite062009
  • protein binding
  • 1.5975811408548 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.2126425713931 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 1.03469202541773 bayes_pls_golite062009
  • transcription regulator activity
  • 0.943706743211193 bayes_pls_golite062009
  • nucleic acid binding
  • 0.708499177773075 bayes_pls_golite062009
  • hydrolase activity
  • 0.52386813728704 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.50197530717959 bayes_pls_golite062009
  • DNA binding
  • 0.365874679056682 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 0.265769062717221 bayes_pls_golite062009
  • transcription factor binding
  • 0.16916169785605 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle