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Protein Overview: VMA13

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data VMA13 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..158] PSI-BLAST 10142.0 Regulatory subunit H of the V-type ATPase
2 View Details [159..239] PSI-BLAST 10142.0 Regulatory subunit H of the V-type ATPase
3 View Details [240..353] PSI-BLAST 10142.0 Regulatory subunit H of the V-type ATPase
4 View Details [354..478] PSI-BLAST 10142.0 Regulatory subunit H of the V-type ATPase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
  • 4.95682565184071 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
  • 4.85364536397482 bayes_pls_golite062009
  • proton-transporting ATPase activity, rotational mechanism
  • 4.07598420103891 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 3.97002944013769 bayes_pls_golite062009
  • binding
  • 2.4389817190572 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.67825644894471 bayes_pls_golite062009
  • protein binding
  • 1.63705839411934 bayes_pls_golite062009
  • cation-transporting ATPase activity
  • 1.42177298480378 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.878543655311892 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.488813981504368 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.409276623620829 bayes_pls_golite062009
  • nucleic acid binding
  • 0.221901941018475 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle