| General Information: |
|
| Name(s) found: |
YPL009C
[SGD]
|
| Description(s) found:
Found 28 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1038 amino acids |
Gene Ontology: |
|
| Cellular Component: |
cytoplasm
[IDA ]
ribosome [IDA ]
|
| Biological Process: |
biological_process
[ND]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MKQRISALDL LLLARELKQD LEGYRLSNIY NIADSSKQFL LKFNKPDSKL NVVVDCGLRI 60
61 YLTEFSRPIP PTPSGFVVKL RKHLKAKRLT ALKQVDQDRI LVLQFADGHF YLVLEFFSAG 120
121 NVILLDENRR IMALQRVVLE HENKVGQIYE MFDESLFTTN NESADESIEK NRKAEYTSEL 180
181 VNEWIKAVQA KYESDITVIK QLNIQGKEGA KKKKVKVPSI HKLLLSKVPH LSSDLLSKNL 240
241 KVFNIDPSES CLNLLEETDS LAELLNSTQL EYNQLLTTTD RKGYILAKRN ENYISEKDTA 300
301 DLEFIYDTFH PFKPYINGGD TDSSCIIEVE GPYNRTLDKF FSTIESSKYA LRIQNQESQA 360
361 QKKIDDARAE NDRKIQALLD VQELNERKGH LIIENAPLIE EVKLAVQGLI DQQMDWNTIE 420
421 KLIKSEQKKG NRIAQLLNLP LNLKQNKISV KLDLSSKELN TSSDEDNESE GNTTDSSSDS 480
481 DSEDMESSKE RSTKSMKRKS NEKINVTIDL GLSAYANATE YFNIKKTSAQ KQKKVEKNVG 540
541 KAMKNIEVKI DQQLKKKLKD SHSVLKKIRT PYFFEKYSWF ISSEGFLVMM GKSPAETDQI 600
601 YSKYIEDDDI YMSNSFNSHV WIKNPEKTEV PPNTLMQAGI LCMSSSEAWS KKISSSPWWC 660
661 FAKNVSKFDG SDNSILPEGA FRLKNENDQN HLPPAQLVMG FGFLWKVKTS GNEDNGDDDE 720
721 EEEEEEEEEE EEEEEEEEEE EEEKEEEEKE EEQQQDEDDS NEVNGLEKGG DSNDSTKNNS 780
781 FEHDNLEKDI EKHCTISSDT DSDSGNAKAK NDNSSTQRIL DEPGVPISLI ENINSNVRGK 840
841 RGKLKKIQKK YADQDETERL LRLEALGTLK GIEKQQQRKK EEIMKREVRE DRKNKREKQR 900
901 RLQALKFTKK EKARVNYDKH KSELKPSLDK GDVVDDIIPV FAPWPALLKY KYKVKIQPGS 960
961 AKKTKTLTEI LHYFKSRPLD GSSTDNEMDW PQEHEMIKGL KEQDLVLLLC VDKLKVTIAG1020
1021 QKSTKNGGNS SKKGKKKR |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Krogan NJ, et al. (2006) |
|
CBF5 JJJ1 PDS1 YPL009C |
| View Details | Gavin AC, et al. (2006) |
|
RPL27B SHM1 YPL009C |
| View Details | Gavin AC, et al. (2002) |
|
ADE3 ARX1 DBP2 LSG1 MIS1 NOG1 NOP7 NUG1 RAT1 SHM1 YPL009C |
| View Details | Ho Y, et al. (2002) |
|
BRX1 CKB1 COX6 FET4 GAR1 NIP7 NMD3 NOC2 NOP1 NOP2 NOP56 NOP7 NSA1 NSA2 NUG1 PHO84 RRP1 YPL009C |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Cheeseman IM, et al. (2002) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..254] |  |
77.69897 | Heavy meromyosin subfragment |
| 2 | View Details | [255..569] | |
77.69897 | Heavy meromyosin subfragment |
| 3 | View Details | [570..700] | |
2.243989 | View MSA. No confident structure predictions are available. |
| 4 | View Details | [701..928] | |
7.059996 | View MSA. No confident structure predictions are available. |
| 5 | View Details | [929..1038] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.62 |
Source: Reynolds et al. (2008)