| General Information: |
|
| Name(s) found: |
NSP1 /
YJL041W
[SGD]
|
| Description(s) found:
Found 25 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 823 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nuclear pore
[IDA ]
|
| Biological Process: |
protein export from nucleus
[TAS]
ribosomal protein import into nucleus [TAS ]
mRNA export from nucleus [TAS ]
ribosomal large subunit export from nucleus [IMP ]
rRNA export from nucleus [TAS ]
RNA export from nucleus [IGI ][IPI]
nuclear pore organization [IGI ][IMP][IPI]
snRNP protein import into nucleus [TAS ]
mRNA-binding (hnRNP) protein import into nucleus [TAS ]
snRNA export from nucleus [TAS ]
protein import into nucleus [IMP ]
tRNA export from nucleus [TAS ]
NLS-bearing substrate import into nucleus [TAS ]
|
| Molecular Function: |
structural molecule activity
[TAS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MNFNTPQQNK TPFSFGTANN NSNTTNQNSS TGAGAFGTGQ STFGFNNSAP NNTNNANSSI 60
61 TPAFGSNNTG NTAFGNSNPT SNVFGSNNST TNTFGSNSAG TSLFGSSSAQ QTKSNGTAGG 120
121 NTFGSSSLFN NSTNSNTTKP AFGGLNFGGG NNTTPSSTGN ANTSNNLFGA TANANKPAFS 180
181 FGATTNDDKK TEPDKPAFSF NSSVGNKTDA QAPTTGFSFG SQLGGNKTVN EAAKPSLSFG 240
241 SGSAGANPAG ASQPEPTTNE PAKPALSFGT ATSDNKTTNT TPSFSFGAKS DENKAGATSK 300
301 PAFSFGAKPE EKKDDNSSKP AFSFGAKSNE DKQDGTAKPA FSFGAKPAEK NNNETSKPAF 360
361 SFGAKSDEKK DGDASKPAFS FGAKPDENKA SATSKPAFSF GAKPEEKKDD NSSKPAFSFG 420
421 AKSNEDKQDG TAKPAFSFGA KPAEKNNNET SKPAFSFGAK SDEKKDGDAS KPAFSFGAKS 480
481 DEKKDSDSSK PAFSFGTKSN EKKDSGSSKP AFSFGAKPDE KKNDEVSKPA FSFGAKANEK 540
541 KESDESKSAF SFGSKPTGKE EGDGAKAAIS FGAKPEEQKS SDTSKPAFTF GAQKDNEKKT 600
601 EESSTGKSTA DVKSSDSLKL NSKPVELKPV SLDNKTLDDL VTKWTNQLTE SASHFEQYTK 660
661 KINSWDQVLV KGGEQISQLY SDAVMAEHSQ NKIDQSLQYI ERQQDELENF LDNFETKTEA 720
721 LLSDVVSTSS GAAANNNDQK RQQAYKTAQT LDENLNSLSS NLSSLIVEIN NVSNTFNKTT 780
781 NIDINNEDEN IQLIKILNSH FDALRSLDDN STSLEKQINS IKK |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
NIC96 NSP1 NUP116 NUP159 NUP82 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
NIC96 NSP1 NUP49 NUP57 NUP82 |
| View Details | Krogan NJ, et al. (2006) |
|
NSP1 NUP133 NUP159 NUP82 |
| View Details | Gavin AC, et al. (2006) |
|
NSP1 NUP159 NUP82 |
| View Details | Gavin AC, et al. (2002) |
|
MRPL1 MRPL15 MRPL24 MRPL3 MRPL35 MRPL8 NIC96 NSP1 NUP116 NUP159 NUP82 YML6 |
| View Details | Qiu et al. (2008) |
|
ASM4 GLE2 KAP120 NDC1 NIC96 NSP1 NUP1 NUP100 NUP116 NUP133 NUP145 NUP157 NUP159 NUP170 NUP188 NUP192 NUP2 NUP42 NUP49 NUP53 NUP57 NUP82 NUP84 POM152 SEC13 SEH1 SUS1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | his-HA tag on RPA135 | Schneider, DA, et al. (2006) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #10 Mitotic Prep1-TiO2 Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) | |
| View Run | #19b Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) | |
| View Run | #19a Asynchronous Prep1-new search criteria | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..68] |  |
14.54 | Fibrinogen |
| 2 | View Details | [69..361] | |
13.46 | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
| 3 | View Details | [362..525] | |
13.46 | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
| 4 | View Details | [526..628] | |
13.46 | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
| 5 | View Details | [629..823] | |
13.060996 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)