YRC Public Data Repository - Protein Overview

1 11 21 31 41 51 | | | | | | 1 PELNKERPSL QIKLKIEDFI LHKMLGKGSF GKVFLAEFKK TNQFFAIKAL KKDVVLMDDD 60 61 VECTMVEKRV LSLAWEHPFL THMFCTFQTK ENLFFVMEYL NGGDLMYHIQ SCHKFDLSRA 120 121 TFYAAEIILG LQFLHSKGIV YRDLKLDNIL LDKDGHIKIA DFGMCKENML GDAKTNXFCG 180 181 TPDYIAPEIL LGQKYNHSVD WWSFGVLLYE MLIGQSPFHG QDEEELFHSI RMDNPFYPRW 240 241 LEKEAKDLLV KLFVREPEKR LGVRGDIRQH PLFREINWEE LERKEIDPPF RPKVKSPFDC 300 301 SNFDKEFLNE KPRLSFADRA LINSMDQNMF RNFXFMNPGM ERLIS

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..345]	PSI-BLAST	97.0	Crystal Structure of PKC-theta complexed with Staurosporine at 2A resolution

Functions predicted (by domain):

Gene Ontology predictions

Term	Confidence	Notes
phosphotransferase activity, alcohol group as acceptor	5.49988294224815	bayes_pls_golite062009
protein kinase activity	5.4586557943719	bayes_pls_golite062009
kinase activity	5.3287080791198	bayes_pls_golite062009
cyclic nucleotide-dependent protein kinase activity	4.97855712164511	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	4.96052051118534	bayes_pls_golite062009
cAMP-dependent protein kinase activity	4.66277812893755	bayes_pls_golite062009
protein serine/threonine kinase activity	4.46381887831481	bayes_pls_golite062009
transferase activity	3.97138602499442	bayes_pls_golite062009
protein tyrosine kinase activity	2.8153155526437	bayes_pls_golite062009
binding	2.74863538127007	bayes_pls_golite062009
transmembrane receptor activity	2.59526003830791	bayes_pls_golite062009
transmembrane receptor protein kinase activity	2.54265774272269	bayes_pls_golite062009
molecular transducer activity	2.40586892801446	bayes_pls_golite062009
signal transducer activity	2.40586892801446	bayes_pls_golite062009
receptor activity	2.39311927684508	bayes_pls_golite062009
protein binding	2.276111749106	bayes_pls_golite062009
tubulin binding	2.18641675163967	bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity	2.16831387024372	bayes_pls_golite062009
cytoskeletal protein binding	2.12615078788254	bayes_pls_golite062009
receptor signaling protein activity	2.10379226653669	bayes_pls_golite062009
ATP binding	1.97600611746091	bayes_pls_golite062009
adenyl ribonucleotide binding	1.93596671856664	bayes_pls_golite062009
adenyl nucleotide binding	1.90928021591891	bayes_pls_golite062009
microtubule binding	1.88110801192607	bayes_pls_golite062009
actin binding	1.87817875565699	bayes_pls_golite062009
acetylcholine receptor activator activity	1.83545227594542	bayes_pls_golite062009
phosphoinositide 3-kinase binding	1.82515074380651	bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity	1.81249386965144	bayes_pls_golite062009
purine ribonucleotide binding	1.65732943334212	bayes_pls_golite062009
ribonucleotide binding	1.65726906484847	bayes_pls_golite062009
purine nucleotide binding	1.63763394711025	bayes_pls_golite062009
nucleotide binding	1.63195828048121	bayes_pls_golite062009
insulin receptor substrate binding	1.62657794525303	bayes_pls_golite062009
transcription regulator activity	1.56748951434625	bayes_pls_golite062009
DNA binding	1.35333135345112	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	1.32254739984688	bayes_pls_golite062009
gamma-tubulin binding	1.28511591054866	bayes_pls_golite062009
kinase binding	1.26086833316556	bayes_pls_golite062009
ErbB-3 class receptor binding	1.25765701903393	bayes_pls_golite062009
catalytic activity	1.21655087018101	bayes_pls_golite062009
nucleic acid binding	1.16049201286103	bayes_pls_golite062009
transporter activity	1.11833481501707	bayes_pls_golite062009
transcription factor activity	1.10928254946881	bayes_pls_golite062009
protein kinase binding	1.06030596516506	bayes_pls_golite062009
ErbB-2 class receptor binding	1.02996109010965	bayes_pls_golite062009
transmembrane transporter activity	0.97575992765505	bayes_pls_golite062009
cyclin-dependent protein kinase activity	0.959360414036299	bayes_pls_golite062009
growth factor binding	0.86076618871384	bayes_pls_golite062009
MAP kinase activity	0.81943579965027	bayes_pls_golite062009
actin filament binding	0.794152600084	bayes_pls_golite062009
substrate-specific transporter activity	0.705905455086486	bayes_pls_golite062009
structural constituent of cytoskeleton	0.612883428421652	bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity	0.48345772948903	bayes_pls_golite062009
enzyme binding	0.46284745266176	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.450699332958421	bayes_pls_golite062009
protein kinase C activity	0.41587987561486	bayes_pls_golite062009
magnesium ion binding	0.393328812780268	bayes_pls_golite062009
MAP kinase kinase kinase activity	0.37115026509016	bayes_pls_golite062009
MAP kinase kinase activity	0.35402045013148	bayes_pls_golite062009
insulin receptor binding	0.266450215230107	bayes_pls_golite062009
protein complex binding	0.239339759110451	bayes_pls_golite062009
insulin receptor activity	0.237134032032089	bayes_pls_golite062009
SH2 domain binding	0.226760162354251	bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity	0.20643152368029	bayes_pls_golite062009
transforming growth factor beta receptor activity	0.20643152368029	bayes_pls_golite062009
ion transmembrane transporter activity	0.148194101970458	bayes_pls_golite062009
peptide binding	0.118578378753757	bayes_pls_golite062009
transforming growth factor beta receptor activity, type I	0.0506751594607393	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.0040394359628233	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

General Information:
Name(s) found:	gi\|56554577 [NCBI NR]
Description(s) found: Found 2 descriptions. SHOW ALL	gi\|56554577\|pdb\|1XJD\|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution [NCBI NR]
Organism:	Homo sapiens
Length:	345 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Noble WS, et al. (2009) Manuscript in preparation.		ACYP1 ATOX1 BLVRB CA1 CA2 CSTA CUTA DCXR GINS2 HBG1 LXN PNP PSMD10 S100A3 S100A7 SRI TXNDC17 TXNL4B UBE2N gi\|10120604, gi\|... gi\|10120837, gi\|... gi\|10835871 gi\|109156944, gi... gi\|109157346, gi... gi\|109157465, gi... gi\|109157594 gi\|109157674, gi... gi\|109157788 gi\|109158012 gi\|110590280, gi... gi\|110590446 gi\|110590560 gi\|110590765, gi... gi\|110590932 gi\|110591381, gi... gi\|112491246, gi... gi\|112491310 gi\|114793618, gi... gi\|114794372, gi... gi\|11513338, gi\|... gi\|11513535 gi\|11514679, gi\|... gi\|11514702, gi\|... gi\|116668023, gi... gi\|118137486 gi\|118138456 gi\|118138704, gi... gi\|119389238, gi... gi\|119389436, gi... gi\|119389705, gi... gi\|119389937 gi\|119390130, gi... gi\|119390264 gi\|119390294, gi... gi\|119390601, gi... gi\|119390695, gi... gi\|119615408, gi... gi\|122919704, gi... gi\|122919793 gi\|122920303, gi... gi\|126031372 gi\|126031532, gi... gi\|13096204, gi\|... gi\|134104098 gi\|134105304, gi... gi\|134105415 gi\|13786858 gi\|14277752, gi\|... gi\|14277891, gi\|... gi\|14278216 gi\|145579196 gi\|145579988, gi... gi\|145580002 gi\|145580358, gi... gi\|146387037 gi\|146387087 gi\|146387708, gi... gi\|149241061, gi... gi\|149241661 gi\|149243115, gi... gi\|149243333, gi... gi\|149243724 gi\|149243932, gi... gi\|150261449 gi\|151567702, gi... gi\|151567830, gi... gi\|152149216, gi... gi\|157829644, gi... gi\|157830331, gi... gi\|157830510, gi... gi\|157830512, gi... gi\|157831332, gi... gi\|157831419, gi... gi\|157836237 gi\|157878724, gi... gi\|15825656 gi\|15826255, gi\|... gi\|15826826 gi\|158428178 gi\|158429249, gi... gi\|158429481, gi... gi\|158430307, gi... gi\|158430589, gi... gi\|158431483, gi... gi\|159162734, gi... gi\|159795455, gi... gi\|159795465, gi... gi\|159795469, gi... gi\|15988244, gi\|... gi\|160285857, gi... gi\|160285883, gi... gi\|160286349 gi\|160286519 gi\|160877711 gi\|161172139, gi... gi\|161761214 gi\|161761223 gi\|162329958 gi\|162330234, gi... gi\|162330241, gi... gi\|163311088 gi\|165760858, gi... gi\|166235449 gi\|167013479, gi... gi\|168177255 gi\|168177265, gi... gi\|168177334, gi... gi\|169404639, gi... gi\|16975162, gi\|... gi\|169791768 gi\|170785039, gi... gi\|170785224 gi\|171848666, gi... gi\|171849070, gi... gi\|171849082, gi... gi\|171849132 gi\|178847238 gi\|17943123, gi\|... gi\|17943196, gi\|... gi\|17943410, gi\|... gi\|1827787, gi\|1... gi\|183448316 gi\|185177626, gi... gi\|18655462, gi\|... gi\|18655917 gi\|186973104, gi... gi\|187609184 gi\|187609229, gi... gi\|187609406, gi... gi\|189339689 gi\|190016418, gi... gi\|190613713 gi\|1942815, gi\|1... gi\|1942822, gi\|1... gi\|194320090 gi\|194709025 gi\|194709031, gi... gi\|194709169 gi\|195927229, gi... gi\|195927290, gi... gi\|195927632, gi... gi\|196049667, gi... gi\|196049681, gi... gi\|196049875, gi... gi\|196049876, gi... gi\|197107412 gi\|197725027, gi... gi\|197725196 gi\|20150550, gi\|... gi\|203282289 gi\|203282494, gi... gi\|203282535 gi\|208435591 gi\|209156780, gi... gi\|209447449, gi... gi\|210061035 gi\|211939138, gi... gi\|21465470, gi\|... gi\|21465749, gi\|... gi\|21465835 gi\|21466131, gi\|... gi\|215794790 gi\|21730374, gi\|... gi\|218681965, gi... gi\|218766696 gi\|219109210, gi... gi\|219689246 gi\|219689268 gi\|219689274, gi... gi\|221046591, gi... gi\|221046731, gi... gi\|221046857 gi\|22219411 gi\|222447058, gi... gi\|223365809, gi... gi\|223365863 gi\|223673814 gi\|223673956, gi... gi\|224036456, gi... gi\|224510871, gi... gi\|224510910, gi... gi\|224983392, gi... gi\|224983726 gi\|225698051 gi\|225698081, gi... gi\|225698139, gi... gi\|226438235, gi... gi\|226438334, gi... gi\|226887751 gi\|230503 gi\|231215, gi\|23... gi\|23200331, gi\|... gi\|239782044, gi... gi\|239782131, gi... gi\|241913083, gi... gi\|24987534, gi\|... gi\|24987864, gi\|... gi\|2554779, gi\|2... gi\|27066008, gi\|... gi\|27573880, gi\|... gi\|28373373, gi\|... gi\|28373918, gi\|... gi\|28374036, gi\|... gi\|28948710 gi\|2914394 gi\|2914630, gi\|2... gi\|2914660, gi\|2... gi\|2982019, gi\|2... gi\|2982053, gi\|2... gi\|3114385, gi\|3... gi\|3212622, gi\|1... gi\|3318842, gi\|3... gi\|33356941 gi\|33356943, gi\|... gi\|33356996 gi\|33357732 gi\|33929, gi\|932... gi\|34810081, gi\|... gi\|34810362, gi\|... gi\|34810526, gi\|... gi\|34810959, gi\|... gi\|34810991, gi\|... gi\|34811056 gi\|3659935, gi\|3... gi\|3659984 gi\|37927131, gi\|... gi\|37927289 gi\|37927467 gi\|38492430, gi\|... gi\|38492827 gi\|38493020 gi\|39654592, gi\|... gi\|39654823 gi\|40889314, gi\|... gi\|40889414, gi\|... gi\|42543419, gi\|... gi\|42543880 gi\|443013, gi\|22... gi\|4558069 gi\|4558256, gi\|4... gi\|46014882, gi\|... gi\|46014999, gi\|... gi\|46015905 gi\|4699575 gi\|47169313, gi\|... gi\|48425689 gi\|48425694, gi\|... gi\|49258498 gi\|49259219, gi\|... gi\|4929853, gi\|1... gi\|50513352 gi\|5107746, gi\|1... gi\|51247325 gi\|51247362 gi\|51247632 gi\|51247661 gi\|52696121, gi\|... gi\|5542106, gi\|9... gi\|5542337, gi\|2... gi\|55670567, gi\|... gi\|55670669 gi\|56554402, gi\|... gi\|56554434, gi\|... gi\|56554577 gi\|56966103, gi\|... gi\|56966260, gi\|... gi\|56966688, gi\|... gi\|56966691, gi\|... gi\|56967015 gi\|576245, gi\|57... gi\|576247, gi\|57... gi\|58177185 gi\|5821848, gi\|1... gi\|5821937 gi\|5822131, gi\|1... gi\|5822136 gi\|5822323, gi\|5... gi\|5822441 gi\|60593443 gi\|60593479, gi\|... gi\|6137384, gi\|6... gi\|6137498 gi\|61680194 gi\|61680510, gi\|... gi\|61680607 gi\|61680778, gi\|... gi\|61680894, gi\|... gi\|62738746 gi\|6435671 gi\|6435687 gi\|6435763, gi\|6... gi\|6573348, gi\|6... gi\|66361260, gi\|... gi\|67463874 gi\|67464091, gi\|... gi\|67464418, gi\|... gi\|71041514, gi\|... gi\|71041679 gi\|71042001, gi\|... gi\|71042479, gi\|... gi\|71042535, gi\|... gi\|7245309, gi\|3... gi\|7245439 gi\|7245727, gi\|7... gi\|7245729, gi\|7... gi\|73535530 gi\|73535749, gi\|... gi\|73536053 gi\|73536240 gi\|7546567 gi\|75765336, gi\|... gi\|75765457 gi\|75765648 gi\|75766197, gi\|... gi\|75766221 gi\|7766913, gi\|7... gi\|78101293 gi\|78101473 gi\|78101501, gi\|... gi\|78101554, gi\|... gi\|78101719 gi\|82407333, gi\|... gi\|82407399 gi\|82407455, gi\|... gi\|82407545, gi\|... gi\|82407722, gi\|... gi\|82407795, gi\|... gi\|82408249, gi\|... gi\|83753543, gi\|... gi\|83753798 gi\|83753936 gi\|83754035 gi\|83754634, gi\|... gi\|83754940, gi\|... gi\|83754993 gi\|85543966 gi\|8569508, gi\|8... gi\|88192773, gi\|... gi\|90108795, gi\|... gi\|90109109, gi\|... gi\|9256918, gi\|2... gi\|9256925, gi\|9... gi\|93279230, gi\|... gi\|93279357, gi\|... gi\|93279477, gi\|... gi\|93279717 gi\|93279867, gi\|... gi\|93279980 gi\|93279987, gi\|... gi\|99031909, gi\|... gi\|99031990, gi\|... gi\|99032169, gi\|... gi\|99032234, gi\|... gi\|996137, gi\|99...

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: gi|56554577

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: