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Protein Overview: gi|15825656

General Information:
Name(s) found: gi|15825656 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|15825656|pdb|1IJT|A Chain A, Crystal Structure Of Fibroblast Growth Factor 4 (Fgf4) [NCBI NR]
    • Organism: Homo sapiens
    Length: 128 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIKRLRRLYC NVGIGFHLQA LPDGRIGGAH ADTRDSLLEL SPVERGVVSI FGVASRFFVA  60
   61 MSSKGKLYGS PFFTDECTFK EILLPNNYNA YESYKYPGMF IALGKNGKTK KGNRVSPTMK 120
  121 VTHFLPRL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|13786858 gi|15825656 gi|219109210, gi... gi|56554577

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 43.522879 Fibroblast growth factor 4 (FGF4)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • growth factor activity
    		•  5.6790632853895 bayes_pls_golite062009
  • fibroblast growth factor receptor binding
    		•  5.32138222782692 bayes_pls_golite062009
  • receptor binding
    		•  4.8109037277027 bayes_pls_golite062009
  • cytokine activity
    		•  3.06355212621053 bayes_pls_golite062009
  • protein binding
    		•  2.73885234721265 bayes_pls_golite062009
  • binding
    		•  1.9997408351526 bayes_pls_golite062009
  • heparin binding
    		•  1.71092312487163 bayes_pls_golite062009
  • pattern binding
    		•  0.839280621598109 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  0.62267092567268 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.55309369051712 bayes_pls_golite062009
  • nerve growth factor receptor binding
    		•  0.308245352535379 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle