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Protein Overview: gi|33357732

General Information:
Name(s) found: gi|33357732 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|33357732|pdb|1OGA|E Chain E, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition [NCBI NR]
    • Organism: Homo sapiens
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDGGITQSP KYLFRKEGQN VTLSCEQNLN HDAMYWYRQD PGQGLRLIYY SQIVNDFQKG  60
   61 DIAEGYSVSR EKKESFPLTV TSAQKNPTAF YLCASSSRSS YEQYFGPGTR LTVTEDLKNV 120
  121 FPPEVAVFEP SEAEISHTQK ATLVCLATGF YPDHVELSWW VNGKEVHSGV STDPQPLKEQ 180
  181 PALNDSRYSL SSRLRVSATF WQNPRNHFRC QVQFYGLSEN DEWTQDRAKP VTQIVSAEAW 240
  241 GRADQDRGGG CD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|13786858 gi|219109210, gi... gi|33357732 gi|56554577

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 52.221849 T-cell antigen receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • antigen binding
    		•  3.72597633672466 bayes_pls_golite062009
  • binding
    		•  1.98262954718581 bayes_pls_golite062009
  • receptor activity
    		•  1.9202781107236 bayes_pls_golite062009
  • peptide antigen binding
    		•  1.66960790017756 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.50492718932189 bayes_pls_golite062009
  • signal transducer activity
    		•  1.11174153927545 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.11174153927545 bayes_pls_golite062009
  • protein binding
    		•  0.925738463571838 bayes_pls_golite062009
  • receptor binding
    		•  0.601327836278943 bayes_pls_golite062009
  • immunoglobulin binding
    		•  0.48272957113121 bayes_pls_golite062009
  • MHC class II receptor activity
    		•  0.251167772391909 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle