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Protein Overview: gi|7245729, gi|7...

General Information:
Name(s) found: gi|7245729 [NCBI NR]
gi|7245728 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|7245729|pdb|1DEU|B Chain B, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine [NCBI NR]
  • gi|7245728|pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine [NCBI NR]
    • Organism: Homo sapiens
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRRGQTCYRP LRGDGLAPLG RTTYPRPHEY LSPADLPKSW DWRNVDGVNY ASITRNQHIP  60
   61 QYCGSCWAHA STSAMADRIN IKRKGAWPST LLSVQNVIDC GNAGSCEGGN DLSVWDYAHQ 120
  121 HGIPDETCNN YQAKDQECDK FNQCGTCNEF KECHAIRNYT LWRVGDYGSL SGREKMMAEI 180
  181 YANGPISCGI MATERLANYT GGIYAEYQDT TYINHVVSVA GWGISDGTEY WIVRNSWGEP 240
  241 WGERGWLRIV TSTYKDGKGA RYNLAIEEHC TFGDPIV

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|13786858 gi|150261449 gi|219109210, gi... gi|56554577 gi|7245729, gi|7...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 60.522879 (Pro)cathepsin X

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  3.3849697474384 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.21949433847862 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • hydrolase activity
    		•  2.29464693834116 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.26699762664334 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • binding
    		•  0.797283672028226 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.649171767629235 bayes_pls_golite062009
  • protein binding
    		•  0.130065210618838 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle