| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 9 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 5.1182E-11 | 9 | 23 | 5 | 6292 |
| chromatin remodeling complex | 1.0447E-7 | 9 | 99 | 5 | 6292 |
| nucleoplasm part | 9.5284E-6 | 9 | 245 | 5 | 6292 |
| nucleoplasm | 1.374E-5 | 9 | 264 | 5 | 6292 |
| Sin3-type complex | 1.8149E-5 | 9 | 5 | 2 | 6292 |
| nucleus | 3.9292E-5 | 9 | 2041 | 9 | 6292 |
| nuclear lumen | 1.8703E-4 | 9 | 453 | 5 | 6292 |
| organelle lumen | 1.0993E-3 | 9 | 660 | 5 | 6292 |
| intracellular organelle lumen | 1.0993E-3 | 9 | 660 | 5 | 6292 |
| Rpd3L complex | 1.4304E-3 | 9 | 1 | 1 | 6292 |
| Rpd3L-Expanded complex | 1.4304E-3 | 9 | 1 | 1 | 6292 |
| membrane-enclosed lumen | 1.4429E-3 | 9 | 700 | 5 | 6292 |
| nuclear chromatin | 4.5346E-3 | 9 | 73 | 2 | 6292 |
| chromatin | 5.0339E-3 | 9 | 77 | 2 | 6292 |
| Sin3 complex | 5.7106E-3 | 9 | 4 | 1 | 6292 |
| membrane-bounded organelle | 9.9391E-3 | 9 | 3771 | 9 | 6292 |
| intracellular membrane-bounded organelle | 9.9391E-3 | 9 | 3771 | 9 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase activity | 6.6232E-22 | 9 | 32 | 9 | 6292 |
| protein deacetylase activity | 6.6232E-22 | 9 | 32 | 9 | 6292 |
| deacetylase activity | 1.6673E-21 | 9 | 35 | 9 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.9601E-20 | 9 | 48 | 9 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.4759E-18 | 9 | 80 | 9 | 6292 |
| hydrolase activity | 2.7029E-8 | 9 | 911 | 9 | 6292 |
| transcription factor binding | 2.3248E-7 | 9 | 43 | 4 | 6292 |
| transcription corepressor activity | 1.1231E-6 | 9 | 16 | 3 | 6292 |
| transcription cofactor activity | 1.9476E-5 | 9 | 40 | 3 | 6292 |
| transcription repressor activity | 2.6033E-5 | 9 | 44 | 3 | 6292 |
| catalytic activity | 6.2813E-5 | 9 | 2150 | 9 | 6292 |
| transcription coactivator activity | 3.7663E-4 | 9 | 21 | 2 | 6292 |
| transcription activator activity | 3.186E-3 | 9 | 61 | 2 | 6292 |
| protein binding | 7.4954E-3 | 9 | 612 | 4 | 6292 |