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Protein Overview: HMO1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data HMO1 Huh WK, et al. (2003)
View Data HMO1 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..92] deduced N/A Confident ab initio structure predictions are available.
2 View Details [93..246] PSI-BLAST 44.325697 Upstream binding factor

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • DNA binding
  • 5.15324651287773 bayes_pls_golite062009
  • nucleic acid binding
  • 5.01228762819617 bayes_pls_golite062009
  • transcription regulator activity
  • 4.9607192917135 bayes_pls_golite062009
  • transcription factor activity
  • 3.82658263870186 bayes_pls_golite062009
  • binding
  • 3.6211482127468 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 2.96229555092695 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.75319687398598 bayes_pls_golite062009
  • chromatin binding
  • 1.64428658020027 bayes_pls_golite062009
  • transcription activator activity
  • 1.62744929149746 bayes_pls_golite062009
  • transcription repressor activity
  • 1.53825678633232 bayes_pls_golite062009
  • protein binding
  • 1.131658134984 bayes_pls_golite062009
  • transcription factor binding
  • 1.10315330167937 bayes_pls_golite062009
  • DNA bending activity
  • 0.87985209274756 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
  • 0.261169200304829 bayes_pls_golite062009
  • RNA polymerase I transcription factor activity
  • 0.0772111539778018 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle