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Protein Overview: YFL006W

General Information:
Name(s) found: YFL006W [SGD]
Description(s) found:
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  • gi|836748|dbj|BAA09232.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|51013959|gb|AAT93273.1| YFL006W [Saccharomyces cerevisiae] [NCBI NR]
  • sp|P43584|YFA6_YEAST Hypothetical 28.8 kDa protein in SMC1-SEC4 intergenic region [NCBI NR]
  • pir||S56248 probable membrane protein YFL006w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • (P43584) Hypothetical 28.8 kDa protein in SMC1-SEC4 intergenic region [Swiss-Prot]
  • similarity to hypothetical protein TRCDSEMBL:AB024034_15 A. thaliana [mips]
  • YFL006W SGDID:S0001888, Chr VI from 129140-129904 [SGD]
  • YFL006W, Chr VI from 129140-129904 [yeast_orfs2]
  • Chr VI from 129140-129904 [yeastorf3.fasta]
  • YFL006W [Saccharomyces cerevisiae]gi|1175915|sp|P43584|YFA6_YEAST Hypothetical 28.8 kDa protein in SMC1-SEC4 intergenic regiongi|1084677|pir||S56248 probable membrane protein YFL006w - yeast (Saccharomyces cerevisiae)gi|836748|dbj|BAA09232.1| YFL006W [ [nrdb_11152004_Chlamydomonas]
  • YFL006W [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGPNKVLL VPYLVDYVLP FLIGLVKHKD VCALASLDPV RLYAGLGYMP IRKNHVAAIV  60
   61 DYVCSSNVAL SSNQTKLQLA FIQHFLSAEL LQLTEEEKNK ILEFVVSNLY NEQFVEVRVR 120
  121 AASILSDIVH NWKEEQPLLS LIERFAKGLD VNKYTSKERQ KLSKTDIKIH GNVLGLGAII 180
  181 SAFPYVFPLP PWIPKQLSNL SSWARTSGMT GQAAKNTISE FKKVRADTWK FDRASFNTEE 240
  241 LEDLEGVLWR SYYA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Gavin AC, et al. (2002) BLM10 CDC6 DAM1 DBP9 ECM29 EST3 GFA1 INO4 KAP95 LYS12 MDS3 MLH2 NUD1 PDA1 PDB1 PGK1 PRE1 PRE10 PRE2 PRE3 PRE4 PRE5 PRE6 PRE7 PRE8 PRE9 PSE1 PUP3 RGR1 RPN10 RPN11 RPN12 RPN13 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RRP12 SCL1 SLX9 SPA2 SRP1 UBP6 ULP1 YFL006W YMR310C YRA1
    View Details Ho Y, et al. (2002) ADH2 AIM21 BLM10 BUD20 CIC1 COF1 CPR1 EHD3 GPI15 HHF1, HHF2 HMO1 HTB1 HTB2 HYP2 LSM2 MAM33 MDH1 MGM101 MRPS16 OYE2 RLP24 SIR2 SIR3 SIR4 SRP1 TEF4 UTP20 YFL006W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] ORFEUS 9.89 Constant regulatory domain of protein phosphatase 2a, pr65alpha


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle